Gene : Eucgr.K00415 E. grandis v2.0
Defline:  (1 of 1) PF00240//PF01020 - Ubiquitin family (ubiquitin) // Ribosomal L40e family (Ribosomal_L40e) Genomic Order:  327
Name:  ? Eucgr.K00415 Secondary Identifier:  ? PAC:32068239
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00415 0.5kb upstream 0.5kb upstream 1783 true Chr11: 3714518-3716300 Eucalyptus grandis
Eucgr.K00415 0.5kb upstream 0.5kb upstream 500 false Chr11: 3714518-3715017 Eucalyptus grandis
Eucgr.K00415 0.5kb downstream 0.5kb downstream 1783 true Chr11: 3715018-3716800 Eucalyptus grandis
Eucgr.K00415 0.5kb downstream 0.5kb downstream 500 false Chr11: 3716301-3716800 Eucalyptus grandis
Eucgr.K00415 1.0kb upstream 1.0kb upstream 2283 true Chr11: 3714018-3716300 Eucalyptus grandis
Eucgr.K00415 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3714018-3715017 Eucalyptus grandis
Eucgr.K00415 1.0kb downstream 1.0kb downstream 2283 true Chr11: 3715018-3717300 Eucalyptus grandis
Eucgr.K00415 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3716301-3717300 Eucalyptus grandis
Eucgr.K00415 2.0kb upstream 2.0kb upstream 3283 true Chr11: 3713018-3716300 Eucalyptus grandis
Eucgr.K00415 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3713018-3715017 Eucalyptus grandis
Eucgr.K00415 2.0kb downstream 2.0kb downstream 3283 true Chr11: 3715018-3718300 Eucalyptus grandis
Eucgr.K00415 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3716301-3718300 Eucalyptus grandis
Eucgr.K00415 5.0kb upstream 5.0kb upstream 6283 true Chr11: 3710018-3716300 Eucalyptus grandis
Eucgr.K00415 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3710018-3715017 Eucalyptus grandis
Eucgr.K00415 5.0kb downstream 5.0kb downstream 6283 true Chr11: 3715018-3721300 Eucalyptus grandis
Eucgr.K00415 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3716301-3721300 Eucalyptus grandis
Eucgr.K00415 10.0kb upstream 10.0kb upstream 11283 true Chr11: 3705018-3716300 Eucalyptus grandis
Eucgr.K00415 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3705018-3715017 Eucalyptus grandis
Eucgr.K00415 10.0kb downstream 10.0kb downstream 11283 true Chr11: 3715018-3726300 Eucalyptus grandis
Eucgr.K00415 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3716301-3726300 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051787 5270 Rosid View MSA
123754617 5271 Pentapetalae View MSA
122775977 5272 Eudicot View MSA
122050611 5273 Angiosperm View MSA
121312025 5274 Embryophyte View MSA
123425972 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.92295 0.0 12.6425    
cufflinks 3.7625 0.0 12.1132    
cufflinks 1.40135 0.0 5.253    
cufflinks 1.33022 0.0 5.01191    
cufflinks 0.111685 0.0 1.06004 Low Low
cufflinks 8.78266 0.0 25.9666   High

0 Strain