Gene : Cagra.0551s0052 C. grandiflora v1.1
Defline:  (1 of 1) PTHR19924:SF26 - U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 15 HOMOLOG Genomic Order:  52
Name:  ? Cagra.0551s0052 Secondary Identifier:  ? PAC:28898952
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0551s0052 0.5kb upstream 0.5kb upstream 2090 true Scaffold551: 161717-163806 Capsella grandiflora
Cagra.0551s0052 0.5kb upstream 0.5kb upstream 500 false Scaffold551: 163307-163806 Capsella grandiflora
Cagra.0551s0052 0.5kb downstream 0.5kb downstream 2090 true Scaffold551: 161217-163306 Capsella grandiflora
Cagra.0551s0052 0.5kb downstream 0.5kb downstream 500 false Scaffold551: 161217-161716 Capsella grandiflora
Cagra.0551s0052 1.0kb upstream 1.0kb upstream 2590 true Scaffold551: 161717-164306 Capsella grandiflora
Cagra.0551s0052 1.0kb upstream 1.0kb upstream 1000 false Scaffold551: 163307-164306 Capsella grandiflora
Cagra.0551s0052 1.0kb downstream 1.0kb downstream 2590 true Scaffold551: 160717-163306 Capsella grandiflora
Cagra.0551s0052 1.0kb downstream 1.0kb downstream 1000 false Scaffold551: 160717-161716 Capsella grandiflora
Cagra.0551s0052 2.0kb upstream 2.0kb upstream 3590 true Scaffold551: 161717-165306 Capsella grandiflora
Cagra.0551s0052 2.0kb upstream 2.0kb upstream 2000 false Scaffold551: 163307-165306 Capsella grandiflora
Cagra.0551s0052 2.0kb downstream 2.0kb downstream 3590 true Scaffold551: 159717-163306 Capsella grandiflora
Cagra.0551s0052 2.0kb downstream 2.0kb downstream 2000 false Scaffold551: 159717-161716 Capsella grandiflora
Cagra.0551s0052 5.0kb upstream 5.0kb upstream 6590 true Scaffold551: 161717-168306 Capsella grandiflora
Cagra.0551s0052 5.0kb upstream 5.0kb upstream 5000 false Scaffold551: 163307-168306 Capsella grandiflora
Cagra.0551s0052 5.0kb downstream 5.0kb downstream 6590 true Scaffold551: 156717-163306 Capsella grandiflora
Cagra.0551s0052 5.0kb downstream 5.0kb downstream 5000 false Scaffold551: 156717-161716 Capsella grandiflora
Cagra.0551s0052 10.0kb upstream 10.0kb upstream 11590 true Scaffold551: 161717-173306 Capsella grandiflora
Cagra.0551s0052 10.0kb upstream 10.0kb upstream 10000 false Scaffold551: 163307-173306 Capsella grandiflora
Cagra.0551s0052 10.0kb downstream 10.0kb downstream 11590 true Scaffold551: 151717-163306 Capsella grandiflora
Cagra.0551s0052 10.0kb downstream 10.0kb downstream 10000 false Scaffold551: 151717-161716 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041129 5273 Angiosperm View MSA
122372031 5261 Brassicaceae View MSA
123833226 5264 Brassicales-Malvales View MSA
124340267 5266 SBM View MSA
124250528 5268 Malvidae View MSA
124066406 5270 Rosid View MSA
123738501 5271 Pentapetalae View MSA
122791518 5272 Eudicot View MSA
121344745 5274 Embryophyte View MSA
123424806 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain