Protein : Cagra.0558s0014.1.p C. grandiflora v1.1

Secondary Identifier:  PAC:28894460 Organism Name:  Capsella grandiflora
Length:  547   Name:  Cagra.0558s0014.1.p
Quick Links:
 
Quick Links:
 

Ontology Annotation Displayer

Protein Family Displayer

Protein Feature Displayer

Proteins

9 Protein Domains

DB identifier Type Name
IPR011991 Domain Winged helix-turn-helix DNA-binding domain
IPR014284 Domain RNA polymerase sigma-70 like domain
IPR013324 Domain RNA polymerase sigma factor, region 3/4
IPR013325 Domain RNA polymerase sigma factor, region 2
IPR007627 Domain RNA polymerase sigma-70 region 2
IPR007630 Domain RNA polymerase sigma-70 region 4
IPR000943 Domain RNA polymerase sigma-70
IPR007624 Domain RNA polymerase sigma-70 region 3
IPR016262 Family RNA polymerase sigma factor, SigB/C/D/F, plastid
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Cagra.0558s0014.1_CDS 1644   Scaffold558: 71479-74089 Capsella grandiflora

25 Ontology Annotations

Ontology Term Db Gene/Protein Name
G3DSA:1.10.10.10 GENE3D Cagra.0558s0014.1.p
GO:0003677 GO Cagra.0558s0014.1.p
IPR007627 InterPro Cagra.0558s0014.1.p
IPR007630 InterPro Cagra.0558s0014.1.p
IPR000943 InterPro Cagra.0558s0014.1.p
IPR007624 InterPro Cagra.0558s0014.1.p
GO:0006355 GO Cagra.0558s0014.1.p
GO:0016987 GO Cagra.0558s0014.1.p
GO:0003700 GO Cagra.0558s0014.1.p
GO:0006352 GO Cagra.0558s0014.1.p
PTHR30603:SF9 PANTHER Cagra.0558s0014.1.p
PF04539 PFAM Cagra.0558s0014.1.p
IPR016262 InterPro Cagra.0558s0014.1.p
PTHR30603 PANTHER Cagra.0558s0014.1.p
IPR013325 InterPro Cagra.0558s0014.1.p
IPR014284 InterPro Cagra.0558s0014.1.p
IPR011991 InterPro Cagra.0558s0014.1.p
IPR013324 InterPro Cagra.0558s0014.1.p
TIGR02937 TIGRFAMs Cagra.0558s0014.1.p
SSF88659 SSF Cagra.0558s0014.1.p
SSF88946 SSF Cagra.0558s0014.1.p
PIRSF000767 PIRSF Cagra.0558s0014.1.p
PR00046 PRINTS Cagra.0558s0014.1.p
PF04542 PFAM Cagra.0558s0014.1.p
PF04545 PFAM Cagra.0558s0014.1.p

0 Pathway Components

0 Pathways