Gene : Cagra.4395s0110 C. grandiflora v1.1
Defline:  (1 of 5) PTHR32266:SF12 - NICOTIANAMINE SYNTHASE-RELATED Genomic Order:  110
Name:  ? Cagra.4395s0110 Secondary Identifier:  ? PAC:28898420
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5957 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4395s0110 0.5kb upstream 0.5kb upstream 1708 true Scaffold4395: 442332-444039 Capsella grandiflora
Cagra.4395s0110 0.5kb upstream 0.5kb upstream 500 false Scaffold4395: 442332-442831 Capsella grandiflora
Cagra.4395s0110 0.5kb downstream 0.5kb downstream 1708 true Scaffold4395: 442832-444539 Capsella grandiflora
Cagra.4395s0110 0.5kb downstream 0.5kb downstream 500 false Scaffold4395: 444040-444539 Capsella grandiflora
Cagra.4395s0110 1.0kb upstream 1.0kb upstream 2208 true Scaffold4395: 441832-444039 Capsella grandiflora
Cagra.4395s0110 1.0kb upstream 1.0kb upstream 1000 false Scaffold4395: 441832-442831 Capsella grandiflora
Cagra.4395s0110 1.0kb downstream 1.0kb downstream 2208 true Scaffold4395: 442832-445039 Capsella grandiflora
Cagra.4395s0110 1.0kb downstream 1.0kb downstream 1000 false Scaffold4395: 444040-445039 Capsella grandiflora
Cagra.4395s0110 2.0kb upstream 2.0kb upstream 3208 true Scaffold4395: 440832-444039 Capsella grandiflora
Cagra.4395s0110 2.0kb upstream 2.0kb upstream 2000 false Scaffold4395: 440832-442831 Capsella grandiflora
Cagra.4395s0110 2.0kb downstream 2.0kb downstream 3208 true Scaffold4395: 442832-446039 Capsella grandiflora
Cagra.4395s0110 2.0kb downstream 2.0kb downstream 2000 false Scaffold4395: 444040-446039 Capsella grandiflora
Cagra.4395s0110 5.0kb upstream 5.0kb upstream 6208 true Scaffold4395: 437832-444039 Capsella grandiflora
Cagra.4395s0110 5.0kb upstream 5.0kb upstream 5000 false Scaffold4395: 437832-442831 Capsella grandiflora
Cagra.4395s0110 5.0kb downstream 5.0kb downstream 6208 true Scaffold4395: 442832-449039 Capsella grandiflora
Cagra.4395s0110 5.0kb downstream 5.0kb downstream 5000 false Scaffold4395: 444040-449039 Capsella grandiflora
Cagra.4395s0110 10.0kb upstream 10.0kb upstream 11208 true Scaffold4395: 432832-444039 Capsella grandiflora
Cagra.4395s0110 10.0kb upstream 10.0kb upstream 10000 false Scaffold4395: 432832-442831 Capsella grandiflora
Cagra.4395s0110 10.0kb downstream 10.0kb downstream 11208 true Scaffold4395: 442832-454039 Capsella grandiflora
Cagra.4395s0110 10.0kb downstream 10.0kb downstream 10000 false Scaffold4395: 444040-454039 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367784 5261 Brassicaceae View MSA
123830815 5264 Brassicales-Malvales View MSA
124346963 5266 SBM View MSA
124238052 5268 Malvidae View MSA
124066045 5270 Rosid View MSA
123750791 5271 Pentapetalae View MSA
122792107 5272 Eudicot View MSA
122044478 5273 Angiosperm View MSA
121350055 5274 Embryophyte View MSA
123381558 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain