Gene : Cagra.0605s0068 C. grandiflora v1.1
Defline:  (1 of 4) KOG0004 - Ubiquitin/40S ribosomal protein S27a fusion Genomic Order:  68
Name:  ? Cagra.0605s0068 Secondary Identifier:  ? PAC:28917895
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0605s0068 0.5kb upstream 0.5kb upstream 971 true Scaffold605: 205638-206608 Capsella grandiflora
Cagra.0605s0068 0.5kb upstream 0.5kb upstream 500 false Scaffold605: 206109-206608 Capsella grandiflora
Cagra.0605s0068 0.5kb downstream 0.5kb downstream 971 true Scaffold605: 205138-206108 Capsella grandiflora
Cagra.0605s0068 0.5kb downstream 0.5kb downstream 500 false Scaffold605: 205138-205637 Capsella grandiflora
Cagra.0605s0068 1.0kb upstream 1.0kb upstream 1471 true Scaffold605: 205638-207108 Capsella grandiflora
Cagra.0605s0068 1.0kb upstream 1.0kb upstream 1000 false Scaffold605: 206109-207108 Capsella grandiflora
Cagra.0605s0068 1.0kb downstream 1.0kb downstream 1471 true Scaffold605: 204638-206108 Capsella grandiflora
Cagra.0605s0068 1.0kb downstream 1.0kb downstream 1000 false Scaffold605: 204638-205637 Capsella grandiflora
Cagra.0605s0068 2.0kb upstream 2.0kb upstream 2471 true Scaffold605: 205638-208108 Capsella grandiflora
Cagra.0605s0068 2.0kb upstream 2.0kb upstream 2000 false Scaffold605: 206109-208108 Capsella grandiflora
Cagra.0605s0068 2.0kb downstream 2.0kb downstream 2471 true Scaffold605: 203638-206108 Capsella grandiflora
Cagra.0605s0068 2.0kb downstream 2.0kb downstream 2000 false Scaffold605: 203638-205637 Capsella grandiflora
Cagra.0605s0068 5.0kb upstream 5.0kb upstream 5471 true Scaffold605: 205638-211108 Capsella grandiflora
Cagra.0605s0068 5.0kb upstream 5.0kb upstream 5000 false Scaffold605: 206109-211108 Capsella grandiflora
Cagra.0605s0068 5.0kb downstream 5.0kb downstream 5471 true Scaffold605: 200638-206108 Capsella grandiflora
Cagra.0605s0068 5.0kb downstream 5.0kb downstream 5000 false Scaffold605: 200638-205637 Capsella grandiflora
Cagra.0605s0068 10.0kb upstream 10.0kb upstream 10471 true Scaffold605: 205638-216108 Capsella grandiflora
Cagra.0605s0068 10.0kb upstream 10.0kb upstream 10000 false Scaffold605: 206109-216108 Capsella grandiflora
Cagra.0605s0068 10.0kb downstream 10.0kb downstream 10471 true Scaffold605: 195638-206108 Capsella grandiflora
Cagra.0605s0068 10.0kb downstream 10.0kb downstream 10000 false Scaffold605: 195638-205637 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365617 5261 Brassicaceae View MSA
123798998 5264 Brassicales-Malvales View MSA
124296566 5266 SBM View MSA
124148679 5268 Malvidae View MSA
123874630 5270 Rosid View MSA
123736823 5271 Pentapetalae View MSA
122788692 5272 Eudicot View MSA
122045257 5273 Angiosperm View MSA
121350332 5274 Embryophyte View MSA
123424740 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain