Gene : Cagra.0578s0074 C. grandiflora v1.1
Defline:  (1 of 11) PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  74
Name:  ? Cagra.0578s0074 Secondary Identifier:  ? PAC:28898695
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0578s0074 0.5kb upstream 0.5kb upstream 2912 true Scaffold578: 276735-279646 Capsella grandiflora
Cagra.0578s0074 0.5kb upstream 0.5kb upstream 500 false Scaffold578: 279147-279646 Capsella grandiflora
Cagra.0578s0074 0.5kb downstream 0.5kb downstream 2912 true Scaffold578: 276235-279146 Capsella grandiflora
Cagra.0578s0074 0.5kb downstream 0.5kb downstream 500 false Scaffold578: 276235-276734 Capsella grandiflora
Cagra.0578s0074 1.0kb upstream 1.0kb upstream 3412 true Scaffold578: 276735-280146 Capsella grandiflora
Cagra.0578s0074 1.0kb upstream 1.0kb upstream 1000 false Scaffold578: 279147-280146 Capsella grandiflora
Cagra.0578s0074 1.0kb downstream 1.0kb downstream 3412 true Scaffold578: 275735-279146 Capsella grandiflora
Cagra.0578s0074 1.0kb downstream 1.0kb downstream 1000 false Scaffold578: 275735-276734 Capsella grandiflora
Cagra.0578s0074 2.0kb upstream 2.0kb upstream 4412 true Scaffold578: 276735-281146 Capsella grandiflora
Cagra.0578s0074 2.0kb upstream 2.0kb upstream 2000 false Scaffold578: 279147-281146 Capsella grandiflora
Cagra.0578s0074 2.0kb downstream 2.0kb downstream 4412 true Scaffold578: 274735-279146 Capsella grandiflora
Cagra.0578s0074 2.0kb downstream 2.0kb downstream 2000 false Scaffold578: 274735-276734 Capsella grandiflora
Cagra.0578s0074 5.0kb upstream 5.0kb upstream 7412 true Scaffold578: 276735-284146 Capsella grandiflora
Cagra.0578s0074 5.0kb upstream 5.0kb upstream 5000 false Scaffold578: 279147-284146 Capsella grandiflora
Cagra.0578s0074 5.0kb downstream 5.0kb downstream 7412 true Scaffold578: 271735-279146 Capsella grandiflora
Cagra.0578s0074 5.0kb downstream 5.0kb downstream 5000 false Scaffold578: 271735-276734 Capsella grandiflora
Cagra.0578s0074 10.0kb upstream 10.0kb upstream 12412 true Scaffold578: 276735-289146 Capsella grandiflora
Cagra.0578s0074 10.0kb upstream 10.0kb upstream 10000 false Scaffold578: 279147-289146 Capsella grandiflora
Cagra.0578s0074 10.0kb downstream 10.0kb downstream 12412 true Scaffold578: 266735-279146 Capsella grandiflora
Cagra.0578s0074 10.0kb downstream 10.0kb downstream 10000 false Scaffold578: 266735-276734 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366441 5261 Brassicaceae View MSA
123834289 5264 Brassicales-Malvales View MSA
124345164 5266 SBM View MSA
124241999 5268 Malvidae View MSA
124067797 5270 Rosid View MSA
123744746 5271 Pentapetalae View MSA
122794994 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain