Gene : Cagra.4961s0003 C. grandiflora v1.1
Defline:  (1 of 7) PF07816 - Protein of unknown function (DUF1645) (DUF1645) Genomic Order:  3
Name:  ? Cagra.4961s0003 Secondary Identifier:  ? PAC:28915028
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4961s0003 0.5kb upstream 0.5kb upstream 1277 true Scaffold4961: 15222-16498 Capsella grandiflora
Cagra.4961s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold4961: 15222-15721 Capsella grandiflora
Cagra.4961s0003 0.5kb downstream 0.5kb downstream 1277 true Scaffold4961: 15722-16998 Capsella grandiflora
Cagra.4961s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold4961: 16499-16998 Capsella grandiflora
Cagra.4961s0003 1.0kb upstream 1.0kb upstream 1777 true Scaffold4961: 14722-16498 Capsella grandiflora
Cagra.4961s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold4961: 14722-15721 Capsella grandiflora
Cagra.4961s0003 1.0kb downstream 1.0kb downstream 1777 true Scaffold4961: 15722-17498 Capsella grandiflora
Cagra.4961s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold4961: 16499-17498 Capsella grandiflora
Cagra.4961s0003 2.0kb upstream 2.0kb upstream 2777 true Scaffold4961: 13722-16498 Capsella grandiflora
Cagra.4961s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold4961: 13722-15721 Capsella grandiflora
Cagra.4961s0003 2.0kb downstream 2.0kb downstream 2777 true Scaffold4961: 15722-18498 Capsella grandiflora
Cagra.4961s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold4961: 16499-18498 Capsella grandiflora
Cagra.4961s0003 5.0kb upstream 5.0kb upstream 5777 true Scaffold4961: 10722-16498 Capsella grandiflora
Cagra.4961s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold4961: 10722-15721 Capsella grandiflora
Cagra.4961s0003 5.0kb downstream 5.0kb downstream 5777 true Scaffold4961: 15722-21498 Capsella grandiflora
Cagra.4961s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold4961: 16499-21498 Capsella grandiflora
Cagra.4961s0003 10.0kb upstream 10.0kb upstream 10777 true Scaffold4961: 5722-16498 Capsella grandiflora
Cagra.4961s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold4961: 5722-15721 Capsella grandiflora
Cagra.4961s0003 10.0kb downstream 10.0kb downstream 10777 true Scaffold4961: 15722-26498 Capsella grandiflora
Cagra.4961s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold4961: 16499-26498 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374960 5261 Brassicaceae View MSA
123833567 5264 Brassicales-Malvales View MSA
124346958 5266 SBM View MSA
124243956 5268 Malvidae View MSA
124070219 5270 Rosid View MSA
123743916 5271 Pentapetalae View MSA
122785611 5272 Eudicot View MSA
122048154 5273 Angiosperm View MSA
121310868 5274 Embryophyte View MSA
123348251 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain