Gene : Cagra.0664s0050 C. grandiflora v1.1
Defline:  (1 of 1) PF00560//PF13943 - Leucine Rich Repeat (LRR_1) // WPP domain (WPP) Genomic Order:  50
Name:  ? Cagra.0664s0050 Secondary Identifier:  ? PAC:28911819
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0664s0050 0.5kb upstream 0.5kb upstream 2108 true Scaffold664: 157124-159231 Capsella grandiflora
Cagra.0664s0050 0.5kb upstream 0.5kb upstream 500 false Scaffold664: 157124-157623 Capsella grandiflora
Cagra.0664s0050 0.5kb downstream 0.5kb downstream 2108 true Scaffold664: 157624-159731 Capsella grandiflora
Cagra.0664s0050 0.5kb downstream 0.5kb downstream 500 false Scaffold664: 159232-159731 Capsella grandiflora
Cagra.0664s0050 1.0kb upstream 1.0kb upstream 2608 true Scaffold664: 156624-159231 Capsella grandiflora
Cagra.0664s0050 1.0kb upstream 1.0kb upstream 1000 false Scaffold664: 156624-157623 Capsella grandiflora
Cagra.0664s0050 1.0kb downstream 1.0kb downstream 2608 true Scaffold664: 157624-160231 Capsella grandiflora
Cagra.0664s0050 1.0kb downstream 1.0kb downstream 1000 false Scaffold664: 159232-160231 Capsella grandiflora
Cagra.0664s0050 2.0kb upstream 2.0kb upstream 3608 true Scaffold664: 155624-159231 Capsella grandiflora
Cagra.0664s0050 2.0kb upstream 2.0kb upstream 2000 false Scaffold664: 155624-157623 Capsella grandiflora
Cagra.0664s0050 2.0kb downstream 2.0kb downstream 3608 true Scaffold664: 157624-161231 Capsella grandiflora
Cagra.0664s0050 2.0kb downstream 2.0kb downstream 2000 false Scaffold664: 159232-161231 Capsella grandiflora
Cagra.0664s0050 5.0kb upstream 5.0kb upstream 6608 true Scaffold664: 152624-159231 Capsella grandiflora
Cagra.0664s0050 5.0kb upstream 5.0kb upstream 5000 false Scaffold664: 152624-157623 Capsella grandiflora
Cagra.0664s0050 5.0kb downstream 5.0kb downstream 6608 true Scaffold664: 157624-164231 Capsella grandiflora
Cagra.0664s0050 5.0kb downstream 5.0kb downstream 5000 false Scaffold664: 159232-164231 Capsella grandiflora
Cagra.0664s0050 10.0kb upstream 10.0kb upstream 11608 true Scaffold664: 147624-159231 Capsella grandiflora
Cagra.0664s0050 10.0kb upstream 10.0kb upstream 10000 false Scaffold664: 147624-157623 Capsella grandiflora
Cagra.0664s0050 10.0kb downstream 10.0kb downstream 11608 true Scaffold664: 157624-169231 Capsella grandiflora
Cagra.0664s0050 10.0kb downstream 10.0kb downstream 10000 false Scaffold664: 159232-169231 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362453 5261 Brassicaceae View MSA
123837343 5264 Brassicales-Malvales View MSA
124343004 5266 SBM View MSA
124243602 5268 Malvidae View MSA
124062544 5270 Rosid View MSA
123738373 5271 Pentapetalae View MSA
122788979 5272 Eudicot View MSA
122044051 5273 Angiosperm View MSA
121346324 5274 Embryophyte View MSA
123428051 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain