Gene : Cagra.0629s0009 C. grandiflora v1.1
Defline:  (1 of 4) PF04578 - Protein of unknown function, DUF594 (DUF594) Genomic Order:  9
Name:  ? Cagra.0629s0009 Secondary Identifier:  ? PAC:28919920
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0629s0009 0.5kb upstream 0.5kb upstream 2980 true Scaffold629: 25421-28400 Capsella grandiflora
Cagra.0629s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold629: 27901-28400 Capsella grandiflora
Cagra.0629s0009 0.5kb downstream 0.5kb downstream 2980 true Scaffold629: 24921-27900 Capsella grandiflora
Cagra.0629s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold629: 24921-25420 Capsella grandiflora
Cagra.0629s0009 1.0kb upstream 1.0kb upstream 3480 true Scaffold629: 25421-28900 Capsella grandiflora
Cagra.0629s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold629: 27901-28900 Capsella grandiflora
Cagra.0629s0009 1.0kb downstream 1.0kb downstream 3480 true Scaffold629: 24421-27900 Capsella grandiflora
Cagra.0629s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold629: 24421-25420 Capsella grandiflora
Cagra.0629s0009 2.0kb upstream 2.0kb upstream 4480 true Scaffold629: 25421-29900 Capsella grandiflora
Cagra.0629s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold629: 27901-29900 Capsella grandiflora
Cagra.0629s0009 2.0kb downstream 2.0kb downstream 4480 true Scaffold629: 23421-27900 Capsella grandiflora
Cagra.0629s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold629: 23421-25420 Capsella grandiflora
Cagra.0629s0009 5.0kb upstream 5.0kb upstream 7480 true Scaffold629: 25421-32900 Capsella grandiflora
Cagra.0629s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold629: 27901-32900 Capsella grandiflora
Cagra.0629s0009 5.0kb downstream 5.0kb downstream 7480 true Scaffold629: 20421-27900 Capsella grandiflora
Cagra.0629s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold629: 20421-25420 Capsella grandiflora
Cagra.0629s0009 10.0kb upstream 10.0kb upstream 12480 true Scaffold629: 25421-37900 Capsella grandiflora
Cagra.0629s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold629: 27901-37900 Capsella grandiflora
Cagra.0629s0009 10.0kb downstream 10.0kb downstream 12480 true Scaffold629: 15421-27900 Capsella grandiflora
Cagra.0629s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold629: 15421-25420 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029142 5273 Angiosperm View MSA
122370606 5261 Brassicaceae View MSA
123840817 5264 Brassicales-Malvales View MSA
124349984 5266 SBM View MSA
124254475 5268 Malvidae View MSA
124074186 5270 Rosid View MSA
123752826 5271 Pentapetalae View MSA
122795885 5272 Eudicot View MSA
121350539 5274 Embryophyte View MSA
123381781 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain