Gene : Cagra.5120s0021 C. grandiflora v1.1
Defline:  (1 of 1) PTHR19271 - CYTOCHROME B Genomic Order:  21
Name:  ? Cagra.5120s0021 Secondary Identifier:  ? PAC:28904246
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-3781 Capsella grandiflora pathologic  
Cgrandiflora PWY-7279 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5120s0021 0.5kb upstream 0.5kb upstream 1240 true Scaffold5120: 67821-69060 Capsella grandiflora
Cagra.5120s0021 0.5kb upstream 0.5kb upstream 1 false Scaffold5120: 69060-69060 Capsella grandiflora
Cagra.5120s0021 0.5kb downstream 0.5kb downstream 1739 true Scaffold5120: 67321-69059 Capsella grandiflora
Cagra.5120s0021 0.5kb downstream 0.5kb downstream 500 false Scaffold5120: 67321-67820 Capsella grandiflora
Cagra.5120s0021 1.0kb upstream 1.0kb upstream 1240 true Scaffold5120: 67821-69060 Capsella grandiflora
Cagra.5120s0021 1.0kb upstream 1.0kb upstream 1 false Scaffold5120: 69060-69060 Capsella grandiflora
Cagra.5120s0021 1.0kb downstream 1.0kb downstream 2239 true Scaffold5120: 66821-69059 Capsella grandiflora
Cagra.5120s0021 1.0kb downstream 1.0kb downstream 1000 false Scaffold5120: 66821-67820 Capsella grandiflora
Cagra.5120s0021 2.0kb upstream 2.0kb upstream 1240 true Scaffold5120: 67821-69060 Capsella grandiflora
Cagra.5120s0021 2.0kb upstream 2.0kb upstream 1 false Scaffold5120: 69060-69060 Capsella grandiflora
Cagra.5120s0021 2.0kb downstream 2.0kb downstream 3239 true Scaffold5120: 65821-69059 Capsella grandiflora
Cagra.5120s0021 2.0kb downstream 2.0kb downstream 2000 false Scaffold5120: 65821-67820 Capsella grandiflora
Cagra.5120s0021 5.0kb upstream 5.0kb upstream 1240 true Scaffold5120: 67821-69060 Capsella grandiflora
Cagra.5120s0021 5.0kb upstream 5.0kb upstream 1 false Scaffold5120: 69060-69060 Capsella grandiflora
Cagra.5120s0021 5.0kb downstream 5.0kb downstream 6239 true Scaffold5120: 62821-69059 Capsella grandiflora
Cagra.5120s0021 5.0kb downstream 5.0kb downstream 5000 false Scaffold5120: 62821-67820 Capsella grandiflora
Cagra.5120s0021 10.0kb upstream 10.0kb upstream 1240 true Scaffold5120: 67821-69060 Capsella grandiflora
Cagra.5120s0021 10.0kb upstream 10.0kb upstream 1 false Scaffold5120: 69060-69060 Capsella grandiflora
Cagra.5120s0021 10.0kb downstream 10.0kb downstream 11239 true Scaffold5120: 57821-69059 Capsella grandiflora
Cagra.5120s0021 10.0kb downstream 10.0kb downstream 10000 false Scaffold5120: 57821-67820 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379244 5261 Brassicaceae View MSA
123837235 5264 Brassicales-Malvales View MSA
124322266 5266 SBM View MSA
124248156 5268 Malvidae View MSA
124037998 5270 Rosid View MSA
123742045 5271 Pentapetalae View MSA
122795182 5272 Eudicot View MSA
122050945 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121350678 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain