Protein Family : photosystem II reaction center protein C 123428978

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  357

357 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30062.t000002 (1 of 6) K02704 - photosystem II CP47 chlorophyll apoprotein (psbB) R. communis v0.1 1179   30062: 333163-334341
30131.t000223 (1 of 6) K02704 - photosystem II CP47 chlorophyll apoprotein (psbB) R. communis v0.1 1267   30131: 1313797-1315063
30185.t000015 (1 of 6) K02704 - photosystem II CP47 chlorophyll apoprotein (psbB) R. communis v0.1 1323   30185: 132031-133353
30198.t000037 (1 of 6) K02704 - photosystem II CP47 chlorophyll apoprotein (psbB) R. communis v0.1 1296   30198: 905727-907022
29652.t000006 (1 of 1) PTHR33180:SF4 - PHOTOSYSTEM II CP43 CHLOROPHYLL APOPROTEIN R. communis v0.1 414   29652: 394605-395018
29600.t000002 (1 of 6) K02704 - photosystem II CP47 chlorophyll apoprotein (psbB) R. communis v0.1 539   29600: 29629-30167
ATCG00720 (1 of 1) K02635 - cytochrome b6 (petB) A. thaliana TAIR10 1452   ChrC: 74841-76292
ATCG00680 (1 of 1) K02704 - photosystem II CP47 chlorophyll apoprotein (psbB) A. thaliana TAIR10 1527   ChrC: 72371-73897
ATCG00280 (1 of 1) K02705 - photosystem II CP43 chlorophyll apoprotein (psbC) A. thaliana TAIR10 1422   ChrC: 33720-35141
ATMG00220 (1 of 1) PTHR19271//PTHR19271:SF5 - CYTOCHROME B // CYTOCHROME B A. thaliana TAIR10 1182   ChrM: 60235-61416
AT2G07727 (1 of 2) K00412 - ubiquinol-cytochrome c reductase cytochrome b subunit (CYTB, petB) A. thaliana TAIR10 1467   Chr2: 3450578-3452044
Thhalv10011056m.g (1 of 2) PTHR33180:SF4 - PHOTOSYSTEM II CP43 CHLOROPHYLL APOPROTEIN E. salsugineum v1.0 1052   scaffold_16: 5930710-5931761
Thhalv10001270m.g (1 of 1) PTHR19271 - CYTOCHROME B E. salsugineum v1.0 1182   scaffold_21: 951194-952375
Ciclev10003393m.g (1 of 1) PTHR19271:SF8 - CYTOCHROME B6 C. clementina v1.0 387   scaffold_5: 22617701-22618087
Lus10006593.g (1 of 3) PF00421 - Photosystem II protein (PSII) L. usitatissimum v1.0 540   scaffold36: 268881-269420
Lus10006594.g (1 of 3) PF00421 - Photosystem II protein (PSII) L. usitatissimum v1.0 900   scaffold36: 269528-270427
Gorai.001G099800 (1 of 19) PF00421 - Photosystem II protein (PSII) G. raimondii v2.1 852   Chr01: 11194121-11194972
Gorai.001G162000 (1 of 1) PTHR19271:SF5 - CYTOCHROME B G. raimondii v2.1 1365   Chr01: 23295604-23296968
Gorai.003G087600 (1 of 19) PF00421 - Photosystem II protein (PSII) G. raimondii v2.1 318   Chr03: 23532466-23532783
Gorai.005G110500 (1 of 19) PF00421 - Photosystem II protein (PSII) G. raimondii v2.1 1528   Chr05: 20169732-20171259
Gorai.005G137700 (1 of 5) PTHR19271:SF8 - CYTOCHROME B6 G. raimondii v2.1 647   Chr05: 35626556-35627202
Gorai.009G308600 (1 of 5) PTHR19271:SF8 - CYTOCHROME B6 G. raimondii v2.1 270   Chr09: 28389503-28389772
Gorai.010G129900 (1 of 19) PF00421 - Photosystem II protein (PSII) G. raimondii v2.1 1060   Chr10: 28181736-28182795
Gorai.N012700 (1 of 19) PF00421 - Photosystem II protein (PSII) G. raimondii v2.1 228   scaffold_42: 13341-13568
Gorai.007G282700 (1 of 5) PTHR33180:SF5 - PHOTOSYSTEM II CP47 CHLOROPHYLL APOPROTEIN G. raimondii v2.1 623   Chr07: 48413606-48414228
Gorai.007G252100 (1 of 2) KOG4663 - Cytochrome b G. raimondii v2.1 474   Chr07: 40086069-40086542
Gorai.007G283100 (1 of 5) PTHR33180:SF5 - PHOTOSYSTEM II CP47 CHLOROPHYLL APOPROTEIN G. raimondii v2.1 623   Chr07: 48452679-48453301
Gorai.007G251900 (1 of 19) PF00421 - Photosystem II protein (PSII) G. raimondii v2.1 934   Chr07: 40083231-40084164
Gorai.011G213400 (1 of 2) PTHR33180:SF4 - PHOTOSYSTEM II CP43 CHLOROPHYLL APOPROTEIN G. raimondii v2.1 695   Chr11: 51417607-51418301
e_gw1.30.14.1 (1 of 2) PF00421 - Photosystem II protein (PSII) C. subellipsoidea C-169 v2.0 885   scaffold_30: 29442-30326

357 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30062.m000177 R. communis v0.1 123428978 photosystem II reaction center protein C 6 5275 Viridiplantae
30185.m000930 R. communis v0.1 123428978 photosystem II reaction center protein C 6 5275 Viridiplantae
AT2G07727.1 A. thaliana TAIR10 123428978 photosystem II reaction center protein C 5 5275 Viridiplantae
ATMG00220.1 A. thaliana TAIR10 123428978 photosystem II reaction center protein C 5 5275 Viridiplantae
Ciclev10003393m C. clementina v1.0 123428978 photosystem II reaction center protein C 1 5275 Viridiplantae
Gorai.N012700.1 G. raimondii v2.1 123428978 photosystem II reaction center protein C 13 5275 Viridiplantae
Gorai.005G137700.1 G. raimondii v2.1 123428978 photosystem II reaction center protein C 13 5275 Viridiplantae
Gorai.001G162000.1 G. raimondii v2.1 123428978 photosystem II reaction center protein C 13 5275 Viridiplantae
21127 C. subellipsoidea C-169 v2.0 123428978 photosystem II reaction center protein C 3 5275 Viridiplantae
21093 C. subellipsoidea C-169 v2.0 123428978 photosystem II reaction center protein C 3 5275 Viridiplantae
21174 C. subellipsoidea C-169 v2.0 123428978 photosystem II reaction center protein C 3 5275 Viridiplantae
Thecc1EG046381t1 T. cacao v1.1 123428978 photosystem II reaction center protein C 3 5275 Viridiplantae
Thecc1EG046397t1 T. cacao v1.1 123428978 photosystem II reaction center protein C 3 5275 Viridiplantae
Migut.D01432.1.p M. guttatus v2.0 123428978 photosystem II reaction center protein C 4 5275 Viridiplantae
Glyma.08G281300.1.p G. max Wm82.a2.v1 123428978 photosystem II reaction center protein C 4 5275 Viridiplantae
Medtr7g100030.1 M. truncatula Mt4.0v1 123428978 photosystem II reaction center protein C 8 5275 Viridiplantae
Medtr5g041300.1 M. truncatula Mt4.0v1 123428978 photosystem II reaction center protein C 8 5275 Viridiplantae
Medtr4g034790.1 M. truncatula Mt4.0v1 123428978 photosystem II reaction center protein C 8 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00034.61 A. trichopoda v1.0 123428978 photosystem II reaction center protein C 4 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold04036.1 A. trichopoda v1.0 123428978 photosystem II reaction center protein C 4 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold01196.2 A. trichopoda v1.0 123428978 photosystem II reaction center protein C 4 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00585.1 A. trichopoda v1.0 123428978 photosystem II reaction center protein C 4 5275 Viridiplantae
Traes_2AL_EEB8BBB6B.1 T. aestivum v2.2 123428978 photosystem II reaction center protein C 80 5275 Viridiplantae
Traes_2AL_4E621A250.2 T. aestivum v2.2 123428978 photosystem II reaction center protein C 80 5275 Viridiplantae
Traes_4BL_0A92A2224.1 T. aestivum v2.2 123428978 photosystem II reaction center protein C 80 5275 Viridiplantae
Traes_3AL_0A92A2224.1 T. aestivum v2.2 123428978 photosystem II reaction center protein C 80 5275 Viridiplantae
Traes_3B_9E9B2765D.2 T. aestivum v2.2 123428978 photosystem II reaction center protein C 80 5275 Viridiplantae
Traes_3DL_0A92A2224.1 T. aestivum v2.2 123428978 photosystem II reaction center protein C 80 5275 Viridiplantae
Traes_5BS_4E621A250.2 T. aestivum v2.2 123428978 photosystem II reaction center protein C 80 5275 Viridiplantae
Traes_5DL_6E98755EC.1 T. aestivum v2.2 123428978 photosystem II reaction center protein C 80 5275 Viridiplantae