Gene : Lus10006593.g L. usitatissimum v1.0

Defline:  (1 of 3) PF00421 - Photosystem II protein (PSII) Genomic Order:  12
Name:  ? Lus10006593.g Secondary Identifier:  ? PAC:23162686

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10006593.g 0.5kb upstream 0.5kb upstream 1040 true scaffold36: 268881-269920 Linum usitatissimum
Lus10006593.g 0.5kb upstream 0.5kb upstream 500 false scaffold36: 269421-269920 Linum usitatissimum
Lus10006593.g 0.5kb downstream 0.5kb downstream 1040 true scaffold36: 268381-269420 Linum usitatissimum
Lus10006593.g 0.5kb downstream 0.5kb downstream 500 false scaffold36: 268381-268880 Linum usitatissimum
Lus10006593.g 1.0kb upstream 1.0kb upstream 1540 true scaffold36: 268881-270420 Linum usitatissimum
Lus10006593.g 1.0kb upstream 1.0kb upstream 1000 false scaffold36: 269421-270420 Linum usitatissimum
Lus10006593.g 1.0kb downstream 1.0kb downstream 1540 true scaffold36: 267881-269420 Linum usitatissimum
Lus10006593.g 1.0kb downstream 1.0kb downstream 1000 false scaffold36: 267881-268880 Linum usitatissimum
Lus10006593.g 2.0kb upstream 2.0kb upstream 2540 true scaffold36: 268881-271420 Linum usitatissimum
Lus10006593.g 2.0kb upstream 2.0kb upstream 2000 false scaffold36: 269421-271420 Linum usitatissimum
Lus10006593.g 2.0kb downstream 2.0kb downstream 2540 true scaffold36: 266881-269420 Linum usitatissimum
Lus10006593.g 2.0kb downstream 2.0kb downstream 2000 false scaffold36: 266881-268880 Linum usitatissimum
Lus10006593.g 5.0kb upstream 5.0kb upstream 5540 true scaffold36: 268881-274420 Linum usitatissimum
Lus10006593.g 5.0kb upstream 5.0kb upstream 5000 false scaffold36: 269421-274420 Linum usitatissimum
Lus10006593.g 5.0kb downstream 5.0kb downstream 5540 true scaffold36: 263881-269420 Linum usitatissimum
Lus10006593.g 5.0kb downstream 5.0kb downstream 5000 false scaffold36: 263881-268880 Linum usitatissimum
Lus10006593.g 10.0kb upstream 10.0kb upstream 10102 true scaffold36: 268881-278982 Linum usitatissimum
Lus10006593.g 10.0kb upstream 10.0kb upstream 9562 false scaffold36: 269421-278982 Linum usitatissimum
Lus10006593.g 10.0kb downstream 10.0kb downstream 10540 true scaffold36: 258881-269420 Linum usitatissimum
Lus10006593.g 10.0kb downstream 10.0kb downstream 10000 false scaffold36: 258881-268880 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122460161 5262 Malpighiales View MSA
124251306 5268 Malvidae View MSA
124051318 5270 Rosid View MSA
123753691 5271 Pentapetalae View MSA
122787525 5272 Eudicot View MSA
122051576 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121350250 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain