Gene : AT2G07727 A. thaliana TAIR10
Defline:  (1 of 2) K00412 - ubiquinol-cytochrome c reductase cytochrome b subunit (CYTB, petB) Genomic Order:  552
Name:  ? AT2G07727 Secondary Identifier:  ? PAC:19641704
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-3781 Arabidopsis thaliana pathologic  
Athaliana PWY-7279 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G07727 0.5kb upstream 0.5kb upstream 1967 true Chr2: 3450078-3452044 Arabidopsis thaliana
AT2G07727 0.5kb upstream 0.5kb upstream 500 false Chr2: 3450078-3450577 Arabidopsis thaliana
AT2G07727 0.5kb downstream 0.5kb downstream 1967 true Chr2: 3450578-3452544 Arabidopsis thaliana
AT2G07727 0.5kb downstream 0.5kb downstream 500 false Chr2: 3452045-3452544 Arabidopsis thaliana
AT2G07727 1.0kb upstream 1.0kb upstream 2467 true Chr2: 3449578-3452044 Arabidopsis thaliana
AT2G07727 1.0kb upstream 1.0kb upstream 1000 false Chr2: 3449578-3450577 Arabidopsis thaliana
AT2G07727 1.0kb downstream 1.0kb downstream 2467 true Chr2: 3450578-3453044 Arabidopsis thaliana
AT2G07727 1.0kb downstream 1.0kb downstream 1000 false Chr2: 3452045-3453044 Arabidopsis thaliana
AT2G07727 2.0kb upstream 2.0kb upstream 3467 true Chr2: 3448578-3452044 Arabidopsis thaliana
AT2G07727 2.0kb upstream 2.0kb upstream 2000 false Chr2: 3448578-3450577 Arabidopsis thaliana
AT2G07727 2.0kb downstream 2.0kb downstream 3467 true Chr2: 3450578-3454044 Arabidopsis thaliana
AT2G07727 2.0kb downstream 2.0kb downstream 2000 false Chr2: 3452045-3454044 Arabidopsis thaliana
AT2G07727 5.0kb upstream 5.0kb upstream 6467 true Chr2: 3445578-3452044 Arabidopsis thaliana
AT2G07727 5.0kb upstream 5.0kb upstream 5000 false Chr2: 3445578-3450577 Arabidopsis thaliana
AT2G07727 5.0kb downstream 5.0kb downstream 6467 true Chr2: 3450578-3457044 Arabidopsis thaliana
AT2G07727 5.0kb downstream 5.0kb downstream 5000 false Chr2: 3452045-3457044 Arabidopsis thaliana
AT2G07727 10.0kb upstream 10.0kb upstream 11467 true Chr2: 3440578-3452044 Arabidopsis thaliana
AT2G07727 10.0kb upstream 10.0kb upstream 10000 false Chr2: 3440578-3450577 Arabidopsis thaliana
AT2G07727 10.0kb downstream 10.0kb downstream 11467 true Chr2: 3450578-3462044 Arabidopsis thaliana
AT2G07727 10.0kb downstream 10.0kb downstream 10000 false Chr2: 3452045-3462044 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379244 5261 Brassicaceae View MSA
123837235 5264 Brassicales-Malvales View MSA
124322266 5266 SBM View MSA
124248156 5268 Malvidae View MSA
124037998 5270 Rosid View MSA
123742045 5271 Pentapetalae View MSA
122795182 5272 Eudicot View MSA
122050945 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121350678 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.555        
cufflinks 1.042        
cufflinks 1.593        
cufflinks 0.7        
cufflinks 0.357       Low
cufflinks 3.706       High

0 Strain