Gene : ATCG00720 A. thaliana TAIR10
Defline:  (1 of 1) K02635 - cytochrome b6 (petB) Genomic Order:  51
Name:  ? ATCG00720 Secondary Identifier:  ? PAC:19638013
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PHOTOALL-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-101 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
ATCG00720 0.5kb upstream 0.5kb upstream 1952 true ChrC: 74341-76292 Arabidopsis thaliana
ATCG00720 0.5kb upstream 0.5kb upstream 500 false ChrC: 74341-74840 Arabidopsis thaliana
ATCG00720 0.5kb downstream 0.5kb downstream 1952 true ChrC: 74841-76792 Arabidopsis thaliana
ATCG00720 0.5kb downstream 0.5kb downstream 500 false ChrC: 76293-76792 Arabidopsis thaliana
ATCG00720 1.0kb upstream 1.0kb upstream 2452 true ChrC: 73841-76292 Arabidopsis thaliana
ATCG00720 1.0kb upstream 1.0kb upstream 1000 false ChrC: 73841-74840 Arabidopsis thaliana
ATCG00720 1.0kb downstream 1.0kb downstream 2452 true ChrC: 74841-77292 Arabidopsis thaliana
ATCG00720 1.0kb downstream 1.0kb downstream 1000 false ChrC: 76293-77292 Arabidopsis thaliana
ATCG00720 2.0kb upstream 2.0kb upstream 3452 true ChrC: 72841-76292 Arabidopsis thaliana
ATCG00720 2.0kb upstream 2.0kb upstream 2000 false ChrC: 72841-74840 Arabidopsis thaliana
ATCG00720 2.0kb downstream 2.0kb downstream 3452 true ChrC: 74841-78292 Arabidopsis thaliana
ATCG00720 2.0kb downstream 2.0kb downstream 2000 false ChrC: 76293-78292 Arabidopsis thaliana
ATCG00720 5.0kb upstream 5.0kb upstream 6452 true ChrC: 69841-76292 Arabidopsis thaliana
ATCG00720 5.0kb upstream 5.0kb upstream 5000 false ChrC: 69841-74840 Arabidopsis thaliana
ATCG00720 5.0kb downstream 5.0kb downstream 6452 true ChrC: 74841-81292 Arabidopsis thaliana
ATCG00720 5.0kb downstream 5.0kb downstream 5000 false ChrC: 76293-81292 Arabidopsis thaliana
ATCG00720 10.0kb upstream 10.0kb upstream 11452 true ChrC: 64841-76292 Arabidopsis thaliana
ATCG00720 10.0kb upstream 10.0kb upstream 10000 false ChrC: 64841-74840 Arabidopsis thaliana
ATCG00720 10.0kb downstream 10.0kb downstream 11452 true ChrC: 74841-86292 Arabidopsis thaliana
ATCG00720 10.0kb downstream 10.0kb downstream 10000 false ChrC: 76293-86292 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338523 5261 Brassicaceae View MSA
123841093 5264 Brassicales-Malvales View MSA
124322841 5266 SBM View MSA
124254317 5268 Malvidae View MSA
124051319 5270 Rosid View MSA
123751133 5271 Pentapetalae View MSA
122795753 5272 Eudicot View MSA
122050945 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121350678 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.214        
cufflinks 0.786       Low
cufflinks 44.362     High High
cufflinks 0.678       Low
cufflinks 8.665        
cufflinks 2.696        

0 Strain