Sequence Feature Displayer
Ontology Annotation Displayer
2 Pathways
Pathway Identifier | Organism Name | Analysis Method | Analysis Status |
---|---|---|---|
Athaliana PWY-3781 | Arabidopsis thaliana | pathologic | |
Athaliana PWY-7279 | Arabidopsis thaliana | pathologic |
Other
20 Flanking Regions
Region Name | Flank Size | Direction | Length | Gene Included? | Chromosome Location | Organism Name |
---|---|---|---|---|---|---|
ATMG00220 0.5kb upstream | 0.5kb | upstream | 1682 | true | ChrM: 59735-61416 | Arabidopsis thaliana |
ATMG00220 0.5kb upstream | 0.5kb | upstream | 500 | false | ChrM: 59735-60234 | Arabidopsis thaliana |
ATMG00220 0.5kb downstream | 0.5kb | downstream | 1682 | true | ChrM: 60235-61916 | Arabidopsis thaliana |
ATMG00220 0.5kb downstream | 0.5kb | downstream | 500 | false | ChrM: 61417-61916 | Arabidopsis thaliana |
ATMG00220 1.0kb upstream | 1.0kb | upstream | 2182 | true | ChrM: 59235-61416 | Arabidopsis thaliana |
ATMG00220 1.0kb upstream | 1.0kb | upstream | 1000 | false | ChrM: 59235-60234 | Arabidopsis thaliana |
ATMG00220 1.0kb downstream | 1.0kb | downstream | 2182 | true | ChrM: 60235-62416 | Arabidopsis thaliana |
ATMG00220 1.0kb downstream | 1.0kb | downstream | 1000 | false | ChrM: 61417-62416 | Arabidopsis thaliana |
ATMG00220 2.0kb upstream | 2.0kb | upstream | 3182 | true | ChrM: 58235-61416 | Arabidopsis thaliana |
ATMG00220 2.0kb upstream | 2.0kb | upstream | 2000 | false | ChrM: 58235-60234 | Arabidopsis thaliana |
ATMG00220 2.0kb downstream | 2.0kb | downstream | 3182 | true | ChrM: 60235-63416 | Arabidopsis thaliana |
ATMG00220 2.0kb downstream | 2.0kb | downstream | 2000 | false | ChrM: 61417-63416 | Arabidopsis thaliana |
ATMG00220 5.0kb upstream | 5.0kb | upstream | 6182 | true | ChrM: 55235-61416 | Arabidopsis thaliana |
ATMG00220 5.0kb upstream | 5.0kb | upstream | 5000 | false | ChrM: 55235-60234 | Arabidopsis thaliana |
ATMG00220 5.0kb downstream | 5.0kb | downstream | 6182 | true | ChrM: 60235-66416 | Arabidopsis thaliana |
ATMG00220 5.0kb downstream | 5.0kb | downstream | 5000 | false | ChrM: 61417-66416 | Arabidopsis thaliana |
ATMG00220 10.0kb upstream | 10.0kb | upstream | 11182 | true | ChrM: 50235-61416 | Arabidopsis thaliana |
ATMG00220 10.0kb upstream | 10.0kb | upstream | 10000 | false | ChrM: 50235-60234 | Arabidopsis thaliana |
ATMG00220 10.0kb downstream | 10.0kb | downstream | 11182 | true | ChrM: 60235-71416 | Arabidopsis thaliana |
ATMG00220 10.0kb downstream | 10.0kb | downstream | 10000 | false | ChrM: 61417-71416 | Arabidopsis thaliana |
10 Protein Familys
Cluster ID | Method ID | Method Name | Sequence Alignment |
---|---|---|---|
122379244 | 5261 | Brassicaceae | View MSA |
123837235 | 5264 | Brassicales-Malvales | View MSA |
124322266 | 5266 | SBM | View MSA |
124248156 | 5268 | Malvidae | View MSA |
124037998 | 5270 | Rosid | View MSA |
123742045 | 5271 | Pentapetalae | View MSA |
122795182 | 5272 | Eudicot | View MSA |
122050945 | 5273 | Angiosperm | View MSA |
123428978 | 5275 | Viridiplantae | View MSA |
121350678 | 5274 | Embryophyte | View MSA |
6 Rna Seq Expressionss
Analysis Method | Abundance | Low Confidence Limit | High Confidence Limit | Relative Library Expression | Relative Locus Expression |
---|---|---|---|---|---|
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.014 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.079 | Low |