Gene : Cagra.0686s0025 C. grandiflora v1.1
Defline:  (1 of 3) PTHR21495:SF71 - DIRIGENT PROTEIN 1-RELATED Genomic Order:  25
Name:  ? Cagra.0686s0025 Secondary Identifier:  ? PAC:28900997
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0686s0025 0.5kb upstream 0.5kb upstream 1058 true Scaffold686: 90521-91578 Capsella grandiflora
Cagra.0686s0025 0.5kb upstream 0.5kb upstream 500 false Scaffold686: 91079-91578 Capsella grandiflora
Cagra.0686s0025 0.5kb downstream 0.5kb downstream 1058 true Scaffold686: 90021-91078 Capsella grandiflora
Cagra.0686s0025 0.5kb downstream 0.5kb downstream 500 false Scaffold686: 90021-90520 Capsella grandiflora
Cagra.0686s0025 1.0kb upstream 1.0kb upstream 1558 true Scaffold686: 90521-92078 Capsella grandiflora
Cagra.0686s0025 1.0kb upstream 1.0kb upstream 1000 false Scaffold686: 91079-92078 Capsella grandiflora
Cagra.0686s0025 1.0kb downstream 1.0kb downstream 1558 true Scaffold686: 89521-91078 Capsella grandiflora
Cagra.0686s0025 1.0kb downstream 1.0kb downstream 1000 false Scaffold686: 89521-90520 Capsella grandiflora
Cagra.0686s0025 2.0kb upstream 2.0kb upstream 2558 true Scaffold686: 90521-93078 Capsella grandiflora
Cagra.0686s0025 2.0kb upstream 2.0kb upstream 2000 false Scaffold686: 91079-93078 Capsella grandiflora
Cagra.0686s0025 2.0kb downstream 2.0kb downstream 2558 true Scaffold686: 88521-91078 Capsella grandiflora
Cagra.0686s0025 2.0kb downstream 2.0kb downstream 2000 false Scaffold686: 88521-90520 Capsella grandiflora
Cagra.0686s0025 5.0kb upstream 5.0kb upstream 5558 true Scaffold686: 90521-96078 Capsella grandiflora
Cagra.0686s0025 5.0kb upstream 5.0kb upstream 5000 false Scaffold686: 91079-96078 Capsella grandiflora
Cagra.0686s0025 5.0kb downstream 5.0kb downstream 5558 true Scaffold686: 85521-91078 Capsella grandiflora
Cagra.0686s0025 5.0kb downstream 5.0kb downstream 5000 false Scaffold686: 85521-90520 Capsella grandiflora
Cagra.0686s0025 10.0kb upstream 10.0kb upstream 10558 true Scaffold686: 90521-101078 Capsella grandiflora
Cagra.0686s0025 10.0kb upstream 10.0kb upstream 10000 false Scaffold686: 91079-101078 Capsella grandiflora
Cagra.0686s0025 10.0kb downstream 10.0kb downstream 10558 true Scaffold686: 80521-91078 Capsella grandiflora
Cagra.0686s0025 10.0kb downstream 10.0kb downstream 10000 false Scaffold686: 80521-90520 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373511 5261 Brassicaceae View MSA
123839346 5264 Brassicales-Malvales View MSA
124322603 5266 SBM View MSA
124250728 5268 Malvidae View MSA
124074832 5270 Rosid View MSA
123751910 5271 Pentapetalae View MSA
122797233 5272 Eudicot View MSA
122051134 5273 Angiosperm View MSA
121351582 5274 Embryophyte View MSA
123382236 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain