Gene : Cagra.5525s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31621:SF11 - GB Genomic Order:  1
Name:  ? Cagra.5525s0001 Secondary Identifier:  ? PAC:28895007
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5525s0001 0.5kb upstream 0.5kb upstream 1241 true Scaffold5525: 1663-2903 Capsella grandiflora
Cagra.5525s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold5525: 1663-2162 Capsella grandiflora
Cagra.5525s0001 0.5kb downstream 0.5kb downstream 1241 true Scaffold5525: 2163-3403 Capsella grandiflora
Cagra.5525s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold5525: 2904-3403 Capsella grandiflora
Cagra.5525s0001 1.0kb upstream 1.0kb upstream 1741 true Scaffold5525: 1163-2903 Capsella grandiflora
Cagra.5525s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold5525: 1163-2162 Capsella grandiflora
Cagra.5525s0001 1.0kb downstream 1.0kb downstream 1741 true Scaffold5525: 2163-3903 Capsella grandiflora
Cagra.5525s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold5525: 2904-3903 Capsella grandiflora
Cagra.5525s0001 2.0kb upstream 2.0kb upstream 2741 true Scaffold5525: 163-2903 Capsella grandiflora
Cagra.5525s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold5525: 163-2162 Capsella grandiflora
Cagra.5525s0001 2.0kb downstream 2.0kb downstream 2741 true Scaffold5525: 2163-4903 Capsella grandiflora
Cagra.5525s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold5525: 2904-4903 Capsella grandiflora
Cagra.5525s0001 5.0kb upstream 5.0kb upstream 2903 true Scaffold5525: 1-2903 Capsella grandiflora
Cagra.5525s0001 5.0kb upstream 5.0kb upstream 2162 false Scaffold5525: 1-2162 Capsella grandiflora
Cagra.5525s0001 5.0kb downstream 5.0kb downstream 5741 true Scaffold5525: 2163-7903 Capsella grandiflora
Cagra.5525s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold5525: 2904-7903 Capsella grandiflora
Cagra.5525s0001 10.0kb upstream 10.0kb upstream 2903 true Scaffold5525: 1-2903 Capsella grandiflora
Cagra.5525s0001 10.0kb upstream 10.0kb upstream 2162 false Scaffold5525: 1-2162 Capsella grandiflora
Cagra.5525s0001 10.0kb downstream 10.0kb downstream 10741 true Scaffold5525: 2163-12903 Capsella grandiflora
Cagra.5525s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold5525: 2904-12903 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375867 5261 Brassicaceae View MSA
123837401 5264 Brassicales-Malvales View MSA
124337464 5266 SBM View MSA
124241640 5268 Malvidae View MSA
124066648 5270 Rosid View MSA
123739961 5271 Pentapetalae View MSA
122785970 5272 Eudicot View MSA
122049061 5273 Angiosperm View MSA
121349168 5274 Embryophyte View MSA
123426818 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain