Gene : Cagra.0805s0009 C. grandiflora v1.1
Defline:  (1 of 19) PF03087 - Arabidopsis protein of unknown function (DUF241) Genomic Order:  9
Name:  ? Cagra.0805s0009 Secondary Identifier:  ? PAC:28901502
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0805s0009 0.5kb upstream 0.5kb upstream 1292 true Scaffold805: 28111-29402 Capsella grandiflora
Cagra.0805s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold805: 28903-29402 Capsella grandiflora
Cagra.0805s0009 0.5kb downstream 0.5kb downstream 1292 true Scaffold805: 27611-28902 Capsella grandiflora
Cagra.0805s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold805: 27611-28110 Capsella grandiflora
Cagra.0805s0009 1.0kb upstream 1.0kb upstream 1792 true Scaffold805: 28111-29902 Capsella grandiflora
Cagra.0805s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold805: 28903-29902 Capsella grandiflora
Cagra.0805s0009 1.0kb downstream 1.0kb downstream 1792 true Scaffold805: 27111-28902 Capsella grandiflora
Cagra.0805s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold805: 27111-28110 Capsella grandiflora
Cagra.0805s0009 2.0kb upstream 2.0kb upstream 2792 true Scaffold805: 28111-30902 Capsella grandiflora
Cagra.0805s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold805: 28903-30902 Capsella grandiflora
Cagra.0805s0009 2.0kb downstream 2.0kb downstream 2792 true Scaffold805: 26111-28902 Capsella grandiflora
Cagra.0805s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold805: 26111-28110 Capsella grandiflora
Cagra.0805s0009 5.0kb upstream 5.0kb upstream 5792 true Scaffold805: 28111-33902 Capsella grandiflora
Cagra.0805s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold805: 28903-33902 Capsella grandiflora
Cagra.0805s0009 5.0kb downstream 5.0kb downstream 5792 true Scaffold805: 23111-28902 Capsella grandiflora
Cagra.0805s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold805: 23111-28110 Capsella grandiflora
Cagra.0805s0009 10.0kb upstream 10.0kb upstream 10792 true Scaffold805: 28111-38902 Capsella grandiflora
Cagra.0805s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold805: 28903-38902 Capsella grandiflora
Cagra.0805s0009 10.0kb downstream 10.0kb downstream 10792 true Scaffold805: 18111-28902 Capsella grandiflora
Cagra.0805s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold805: 18111-28110 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380125 5261 Brassicaceae View MSA
123839205 5264 Brassicales-Malvales View MSA
124322579 5266 SBM View MSA
124254341 5268 Malvidae View MSA
124063899 5270 Rosid View MSA
123753428 5271 Pentapetalae View MSA
122797760 5272 Eudicot View MSA
122043809 5273 Angiosperm View MSA
121310191 5274 Embryophyte View MSA
123347751 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain