Gene : Cagra.0799s0022 C. grandiflora v1.1
Defline:  (1 of 132) PF00847 - AP2 domain (AP2) Genomic Order:  22
Name:  ? Cagra.0799s0022 Secondary Identifier:  ? PAC:28899116
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0799s0022 0.5kb upstream 0.5kb upstream 1118 true Scaffold799: 83422-84539 Capsella grandiflora
Cagra.0799s0022 0.5kb upstream 0.5kb upstream 500 false Scaffold799: 83422-83921 Capsella grandiflora
Cagra.0799s0022 0.5kb downstream 0.5kb downstream 1118 true Scaffold799: 83922-85039 Capsella grandiflora
Cagra.0799s0022 0.5kb downstream 0.5kb downstream 500 false Scaffold799: 84540-85039 Capsella grandiflora
Cagra.0799s0022 1.0kb upstream 1.0kb upstream 1618 true Scaffold799: 82922-84539 Capsella grandiflora
Cagra.0799s0022 1.0kb upstream 1.0kb upstream 1000 false Scaffold799: 82922-83921 Capsella grandiflora
Cagra.0799s0022 1.0kb downstream 1.0kb downstream 1618 true Scaffold799: 83922-85539 Capsella grandiflora
Cagra.0799s0022 1.0kb downstream 1.0kb downstream 1000 false Scaffold799: 84540-85539 Capsella grandiflora
Cagra.0799s0022 2.0kb upstream 2.0kb upstream 2618 true Scaffold799: 81922-84539 Capsella grandiflora
Cagra.0799s0022 2.0kb upstream 2.0kb upstream 2000 false Scaffold799: 81922-83921 Capsella grandiflora
Cagra.0799s0022 2.0kb downstream 2.0kb downstream 2618 true Scaffold799: 83922-86539 Capsella grandiflora
Cagra.0799s0022 2.0kb downstream 2.0kb downstream 2000 false Scaffold799: 84540-86539 Capsella grandiflora
Cagra.0799s0022 5.0kb upstream 5.0kb upstream 5618 true Scaffold799: 78922-84539 Capsella grandiflora
Cagra.0799s0022 5.0kb upstream 5.0kb upstream 5000 false Scaffold799: 78922-83921 Capsella grandiflora
Cagra.0799s0022 5.0kb downstream 5.0kb downstream 5618 true Scaffold799: 83922-89539 Capsella grandiflora
Cagra.0799s0022 5.0kb downstream 5.0kb downstream 5000 false Scaffold799: 84540-89539 Capsella grandiflora
Cagra.0799s0022 10.0kb upstream 10.0kb upstream 10618 true Scaffold799: 73922-84539 Capsella grandiflora
Cagra.0799s0022 10.0kb upstream 10.0kb upstream 10000 false Scaffold799: 73922-83921 Capsella grandiflora
Cagra.0799s0022 10.0kb downstream 10.0kb downstream 10618 true Scaffold799: 83922-94539 Capsella grandiflora
Cagra.0799s0022 10.0kb downstream 10.0kb downstream 10000 false Scaffold799: 84540-94539 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375918 5261 Brassicaceae View MSA
123835564 5264 Brassicales-Malvales View MSA
124346940 5266 SBM View MSA
124237322 5268 Malvidae View MSA
124072690 5270 Rosid View MSA
123750816 5271 Pentapetalae View MSA
122794401 5272 Eudicot View MSA
122049756 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121349420 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain