Protein Family : Integrase-type DNA-binding superfamily protein 124237322

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  27

27 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30170.t000527 (1 of 113) PF00847 - AP2 domain (AP2) R. communis v0.1 744   30170: 2914878-2915621
orange1.1g036655m.g (1 of 119) PF00847 - AP2 domain (AP2) C. sinensis v1.1 732   scaffold00002: 3353696-3354427
AT1G75490 (1 of 141) PF00847 - AP2 domain (AP2) A. thaliana TAIR10 1205   Chr1: 28335502-28336706
Thhalv10019142m.g (1 of 136) PF00847 - AP2 domain (AP2) E. salsugineum v1.0 618   scaffold_9: 2247365-2247982
Ciclev10002280m.g (1 of 128) PF00847 - AP2 domain (AP2) C. clementina v1.0 1219   scaffold_5: 41461923-41463141
Lus10006127.g (1 of 230) PF00847 - AP2 domain (AP2) L. usitatissimum v1.0 816   scaffold126: 97681-98496
Lus10024298.g (1 of 230) PF00847 - AP2 domain (AP2) L. usitatissimum v1.0 780   scaffold16: 175736-176515
Lus10010632.g (1 of 230) PF00847 - AP2 domain (AP2) L. usitatissimum v1.0 636   scaffold296: 177533-178168
Gorai.005G110100 (1 of 258) PF00847 - AP2 domain (AP2) G. raimondii v2.1 1604   Chr05: 20083361-20084964
Gorai.009G197800 (1 of 258) PF00847 - AP2 domain (AP2) G. raimondii v2.1 906   Chr09: 15279296-15280201
Thecc1EG034132 (1 of 119) PF00847 - AP2 domain (AP2) T. cacao v1.1 1408   scaffold_8: 1569274-1570681
Araha.27603s0004 (1 of 86) PF00847 - AP2 domain (AP2) A. halleri v1.1 943   Scaffold27603: 28409-29351
Cagra.0799s0022 (1 of 132) PF00847 - AP2 domain (AP2) C. grandiflora v1.1 618   Scaffold799: 83922-84539
Brara.B02236 (1 of 279) PF00847 - AP2 domain (AP2) B. rapa FPsc v1.3 597   A02: 14350380-14350976
Brara.G02224 (1 of 279) PF00847 - AP2 domain (AP2) B. rapa FPsc v1.3 615   A07: 19365252-19365866
Brara.G03354 (1 of 279) PF00847 - AP2 domain (AP2) B. rapa FPsc v1.3 621   A07: 25462078-25462698
Bostr.3288s0201 (1 of 143) PF00847 - AP2 domain (AP2) B. stricta v1.2 618   Scaffold3288: 980811-981428
SapurV1A.0025s0940 (1 of 224) PF00847 - AP2 domain (AP2) S. purpurea v1.0 723   chr02: 2038105-2038827
SapurV1A.0188s0060 (1 of 224) PF00847 - AP2 domain (AP2) S. purpurea v1.0 717   chr05: 20840865-20841581
Manes.05G153700 (1 of 193) PF00847 - AP2 domain (AP2) M. esculenta v6.1 702   Chromosome05: 21913203-21913904
Manes.18G019100 (1 of 193) PF00847 - AP2 domain (AP2) M. esculenta v6.1 696   Chromosome18: 1501406-1502101
AL2G35470 (1 of 151) PF00847 - AP2 domain (AP2) A. lyrata v2.1 1180   scaffold_2: 16729675-16730854
Potri.002G029400 (1 of 209) PF00847 - AP2 domain (AP2) P. trichocarpa v3.1 957   Chr02: 1920383-1921339
Potri.005G233300 (1 of 209) PF00847 - AP2 domain (AP2) P. trichocarpa v3.1 1015   Chr05: 24124024-24125038
Podel.05G248100 (1 of 223) PF00847 - AP2 domain (AP2) P. deltoides WV94 v2.1 726   Chr05: 24644667-24645392
Podel.02G030100 (1 of 223) PF00847 - AP2 domain (AP2) P. deltoides WV94 v2.1 723   Chr02: 2025409-2026131
Carub.0002s2235 (1 of 146) PF00847 - AP2 domain (AP2) C. rubella v1.1 887   scaffold_2: 11953311-11954197

27 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Thhalv10019142m E. salsugineum v1.0 124237322 Integrase-type DNA-binding superfamily protein 1 5268 Malvidae
Lus10006127 L. usitatissimum v1.0 124237322 Integrase-type DNA-binding superfamily protein 3 5268 Malvidae
Gorai.005G110100.1 G. raimondii v2.1 124237322 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
Araha.27603s0004.1.p A. halleri v1.1 124237322 Integrase-type DNA-binding superfamily protein 1 5268 Malvidae
SapurV1A.0025s0940.1.p S. purpurea v1.0 124237322 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
SapurV1A.0188s0060.1.p S. purpurea v1.0 124237322 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
AL2G35470.t1 A. lyrata v2.1 124237322 Integrase-type DNA-binding superfamily protein 1 5268 Malvidae
Potri.002G029400.1.p P. trichocarpa v3.1 124237322 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
Podel.05G248100.1.p P. deltoides WV94 v2.1 124237322 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
30170.m014115 R. communis v0.1 124237322 Integrase-type DNA-binding superfamily protein 1 5268 Malvidae
orange1.1g036655m C. sinensis v1.1 124237322 Integrase-type DNA-binding superfamily protein 1 5268 Malvidae
AT1G75490.1 A. thaliana TAIR10 124237322 Integrase-type DNA-binding superfamily protein 1 5268 Malvidae
Ciclev10002280m C. clementina v1.0 124237322 Integrase-type DNA-binding superfamily protein 1 5268 Malvidae
Lus10010632 L. usitatissimum v1.0 124237322 Integrase-type DNA-binding superfamily protein 3 5268 Malvidae
Lus10024298 L. usitatissimum v1.0 124237322 Integrase-type DNA-binding superfamily protein 3 5268 Malvidae
Gorai.009G197800.1 G. raimondii v2.1 124237322 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
Thecc1EG034132t1 T. cacao v1.1 124237322 Integrase-type DNA-binding superfamily protein 1 5268 Malvidae
Cagra.0799s0022.1.p C. grandiflora v1.1 124237322 Integrase-type DNA-binding superfamily protein 1 5268 Malvidae
Brara.G02224.1.p B. rapa FPsc v1.3 124237322 Integrase-type DNA-binding superfamily protein 3 5268 Malvidae
Brara.G03354.1.p B. rapa FPsc v1.3 124237322 Integrase-type DNA-binding superfamily protein 3 5268 Malvidae
Brara.B02236.1.p B. rapa FPsc v1.3 124237322 Integrase-type DNA-binding superfamily protein 3 5268 Malvidae
Bostr.3288s0201.1.p B. stricta v1.2 124237322 Integrase-type DNA-binding superfamily protein 1 5268 Malvidae
Manes.05G153700.1.p M. esculenta v6.1 124237322 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
Manes.18G019100.1.p M. esculenta v6.1 124237322 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
Potri.005G233300.1.p P. trichocarpa v3.1 124237322 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
Podel.02G030100.1.p P. deltoides WV94 v2.1 124237322 Integrase-type DNA-binding superfamily protein 2 5268 Malvidae
Carub.0002s2235.1.p C. rubella v1.1 124237322 Integrase-type DNA-binding superfamily protein 1 5268 Malvidae