Gene : Carub.0002s2235 C. rubella v1.1
Defline:  (1 of 146) PF00847 - AP2 domain (AP2) Genomic Order:  2235
Name:  ? Carub.0002s2235 Secondary Identifier:  ? PAC:39243925
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2235 0.5kb upstream 0.5kb upstream 1387 true scaffold_2: 11952811-11954197 Capsella rubella
Carub.0002s2235 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11952811-11953310 Capsella rubella
Carub.0002s2235 0.5kb downstream 0.5kb downstream 1387 true scaffold_2: 11953311-11954697 Capsella rubella
Carub.0002s2235 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11954198-11954697 Capsella rubella
Carub.0002s2235 1.0kb upstream 1.0kb upstream 1887 true scaffold_2: 11952311-11954197 Capsella rubella
Carub.0002s2235 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11952311-11953310 Capsella rubella
Carub.0002s2235 1.0kb downstream 1.0kb downstream 1887 true scaffold_2: 11953311-11955197 Capsella rubella
Carub.0002s2235 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11954198-11955197 Capsella rubella
Carub.0002s2235 2.0kb upstream 2.0kb upstream 2887 true scaffold_2: 11951311-11954197 Capsella rubella
Carub.0002s2235 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11951311-11953310 Capsella rubella
Carub.0002s2235 2.0kb downstream 2.0kb downstream 2887 true scaffold_2: 11953311-11956197 Capsella rubella
Carub.0002s2235 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11954198-11956197 Capsella rubella
Carub.0002s2235 5.0kb upstream 5.0kb upstream 5887 true scaffold_2: 11948311-11954197 Capsella rubella
Carub.0002s2235 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11948311-11953310 Capsella rubella
Carub.0002s2235 5.0kb downstream 5.0kb downstream 5887 true scaffold_2: 11953311-11959197 Capsella rubella
Carub.0002s2235 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11954198-11959197 Capsella rubella
Carub.0002s2235 10.0kb upstream 10.0kb upstream 10887 true scaffold_2: 11943311-11954197 Capsella rubella
Carub.0002s2235 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11943311-11953310 Capsella rubella
Carub.0002s2235 10.0kb downstream 10.0kb downstream 10887 true scaffold_2: 11953311-11964197 Capsella rubella
Carub.0002s2235 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11954198-11964197 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375918 5261 Brassicaceae View MSA
123835564 5264 Brassicales-Malvales View MSA
124346940 5266 SBM View MSA
124237322 5268 Malvidae View MSA
124072690 5270 Rosid View MSA
123750816 5271 Pentapetalae View MSA
122794401 5272 Eudicot View MSA
122049756 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121349420 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain