Gene : AT1G75490 A. thaliana TAIR10
Defline:  (1 of 141) PF00847 - AP2 domain (AP2) Genomic Order:  6516
Name:  ? AT1G75490 Secondary Identifier:  ? PAC:19651311
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G75490 0.5kb upstream 0.5kb upstream 1705 true Chr1: 28335002-28336706 Arabidopsis thaliana
AT1G75490 0.5kb upstream 0.5kb upstream 500 false Chr1: 28335002-28335501 Arabidopsis thaliana
AT1G75490 0.5kb downstream 0.5kb downstream 1705 true Chr1: 28335502-28337206 Arabidopsis thaliana
AT1G75490 0.5kb downstream 0.5kb downstream 500 false Chr1: 28336707-28337206 Arabidopsis thaliana
AT1G75490 1.0kb upstream 1.0kb upstream 2205 true Chr1: 28334502-28336706 Arabidopsis thaliana
AT1G75490 1.0kb upstream 1.0kb upstream 1000 false Chr1: 28334502-28335501 Arabidopsis thaliana
AT1G75490 1.0kb downstream 1.0kb downstream 2205 true Chr1: 28335502-28337706 Arabidopsis thaliana
AT1G75490 1.0kb downstream 1.0kb downstream 1000 false Chr1: 28336707-28337706 Arabidopsis thaliana
AT1G75490 2.0kb upstream 2.0kb upstream 3205 true Chr1: 28333502-28336706 Arabidopsis thaliana
AT1G75490 2.0kb upstream 2.0kb upstream 2000 false Chr1: 28333502-28335501 Arabidopsis thaliana
AT1G75490 2.0kb downstream 2.0kb downstream 3205 true Chr1: 28335502-28338706 Arabidopsis thaliana
AT1G75490 2.0kb downstream 2.0kb downstream 2000 false Chr1: 28336707-28338706 Arabidopsis thaliana
AT1G75490 5.0kb upstream 5.0kb upstream 6205 true Chr1: 28330502-28336706 Arabidopsis thaliana
AT1G75490 5.0kb upstream 5.0kb upstream 5000 false Chr1: 28330502-28335501 Arabidopsis thaliana
AT1G75490 5.0kb downstream 5.0kb downstream 6205 true Chr1: 28335502-28341706 Arabidopsis thaliana
AT1G75490 5.0kb downstream 5.0kb downstream 5000 false Chr1: 28336707-28341706 Arabidopsis thaliana
AT1G75490 10.0kb upstream 10.0kb upstream 11205 true Chr1: 28325502-28336706 Arabidopsis thaliana
AT1G75490 10.0kb upstream 10.0kb upstream 10000 false Chr1: 28325502-28335501 Arabidopsis thaliana
AT1G75490 10.0kb downstream 10.0kb downstream 11205 true Chr1: 28335502-28346706 Arabidopsis thaliana
AT1G75490 10.0kb downstream 10.0kb downstream 10000 false Chr1: 28336707-28346706 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375918 5261 Brassicaceae View MSA
123835564 5264 Brassicales-Malvales View MSA
124346940 5266 SBM View MSA
124237322 5268 Malvidae View MSA
124072690 5270 Rosid View MSA
123750816 5271 Pentapetalae View MSA
122794401 5272 Eudicot View MSA
122049756 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121349420 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.421        
cufflinks 0.101     Low  
cufflinks 1.379       High
cufflinks 0.249     Low  
cufflinks 1.628       High
cufflinks 0.067     Low Low

0 Strain