Gene : Cagra.0824s0083 C. grandiflora v1.1
Defline:  (1 of 2) PTHR34777:SF1 - VQ MOTIF-CONTAINING PROTEIN Genomic Order:  83
Name:  ? Cagra.0824s0083 Secondary Identifier:  ? PAC:28899946
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0824s0083 0.5kb upstream 0.5kb upstream 1149 true Scaffold824: 283091-284239 Capsella grandiflora
Cagra.0824s0083 0.5kb upstream 0.5kb upstream 500 false Scaffold824: 283740-284239 Capsella grandiflora
Cagra.0824s0083 0.5kb downstream 0.5kb downstream 1149 true Scaffold824: 282591-283739 Capsella grandiflora
Cagra.0824s0083 0.5kb downstream 0.5kb downstream 500 false Scaffold824: 282591-283090 Capsella grandiflora
Cagra.0824s0083 1.0kb upstream 1.0kb upstream 1649 true Scaffold824: 283091-284739 Capsella grandiflora
Cagra.0824s0083 1.0kb upstream 1.0kb upstream 1000 false Scaffold824: 283740-284739 Capsella grandiflora
Cagra.0824s0083 1.0kb downstream 1.0kb downstream 1649 true Scaffold824: 282091-283739 Capsella grandiflora
Cagra.0824s0083 1.0kb downstream 1.0kb downstream 1000 false Scaffold824: 282091-283090 Capsella grandiflora
Cagra.0824s0083 2.0kb upstream 2.0kb upstream 2649 true Scaffold824: 283091-285739 Capsella grandiflora
Cagra.0824s0083 2.0kb upstream 2.0kb upstream 2000 false Scaffold824: 283740-285739 Capsella grandiflora
Cagra.0824s0083 2.0kb downstream 2.0kb downstream 2649 true Scaffold824: 281091-283739 Capsella grandiflora
Cagra.0824s0083 2.0kb downstream 2.0kb downstream 2000 false Scaffold824: 281091-283090 Capsella grandiflora
Cagra.0824s0083 5.0kb upstream 5.0kb upstream 5649 true Scaffold824: 283091-288739 Capsella grandiflora
Cagra.0824s0083 5.0kb upstream 5.0kb upstream 5000 false Scaffold824: 283740-288739 Capsella grandiflora
Cagra.0824s0083 5.0kb downstream 5.0kb downstream 5649 true Scaffold824: 278091-283739 Capsella grandiflora
Cagra.0824s0083 5.0kb downstream 5.0kb downstream 5000 false Scaffold824: 278091-283090 Capsella grandiflora
Cagra.0824s0083 10.0kb upstream 10.0kb upstream 10649 true Scaffold824: 283091-293739 Capsella grandiflora
Cagra.0824s0083 10.0kb upstream 10.0kb upstream 10000 false Scaffold824: 283740-293739 Capsella grandiflora
Cagra.0824s0083 10.0kb downstream 10.0kb downstream 10649 true Scaffold824: 273091-283739 Capsella grandiflora
Cagra.0824s0083 10.0kb downstream 10.0kb downstream 10000 false Scaffold824: 273091-283090 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026461 5273 Angiosperm View MSA
122379980 5261 Brassicaceae View MSA
123840624 5264 Brassicales-Malvales View MSA
124342218 5266 SBM View MSA
124240018 5268 Malvidae View MSA
124050155 5270 Rosid View MSA
123744131 5271 Pentapetalae View MSA
122770912 5272 Eudicot View MSA
121296343 5274 Embryophyte View MSA
123334522 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain