Gene : Cagra.0897s0044 C. grandiflora v1.1
Defline:  (1 of 1) PTHR16019 - SYNAPSE-ASSOCIATED PROTEIN Genomic Order:  44
Name:  ? Cagra.0897s0044 Secondary Identifier:  ? PAC:28902800
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0897s0044 0.5kb upstream 0.5kb upstream 2108 true Scaffold897: 159732-161839 Capsella grandiflora
Cagra.0897s0044 0.5kb upstream 0.5kb upstream 500 false Scaffold897: 159732-160231 Capsella grandiflora
Cagra.0897s0044 0.5kb downstream 0.5kb downstream 2108 true Scaffold897: 160232-162339 Capsella grandiflora
Cagra.0897s0044 0.5kb downstream 0.5kb downstream 500 false Scaffold897: 161840-162339 Capsella grandiflora
Cagra.0897s0044 1.0kb upstream 1.0kb upstream 2608 true Scaffold897: 159232-161839 Capsella grandiflora
Cagra.0897s0044 1.0kb upstream 1.0kb upstream 1000 false Scaffold897: 159232-160231 Capsella grandiflora
Cagra.0897s0044 1.0kb downstream 1.0kb downstream 2608 true Scaffold897: 160232-162839 Capsella grandiflora
Cagra.0897s0044 1.0kb downstream 1.0kb downstream 1000 false Scaffold897: 161840-162839 Capsella grandiflora
Cagra.0897s0044 2.0kb upstream 2.0kb upstream 3608 true Scaffold897: 158232-161839 Capsella grandiflora
Cagra.0897s0044 2.0kb upstream 2.0kb upstream 2000 false Scaffold897: 158232-160231 Capsella grandiflora
Cagra.0897s0044 2.0kb downstream 2.0kb downstream 3608 true Scaffold897: 160232-163839 Capsella grandiflora
Cagra.0897s0044 2.0kb downstream 2.0kb downstream 2000 false Scaffold897: 161840-163839 Capsella grandiflora
Cagra.0897s0044 5.0kb upstream 5.0kb upstream 6608 true Scaffold897: 155232-161839 Capsella grandiflora
Cagra.0897s0044 5.0kb upstream 5.0kb upstream 5000 false Scaffold897: 155232-160231 Capsella grandiflora
Cagra.0897s0044 5.0kb downstream 5.0kb downstream 6608 true Scaffold897: 160232-166839 Capsella grandiflora
Cagra.0897s0044 5.0kb downstream 5.0kb downstream 5000 false Scaffold897: 161840-166839 Capsella grandiflora
Cagra.0897s0044 10.0kb upstream 10.0kb upstream 11608 true Scaffold897: 150232-161839 Capsella grandiflora
Cagra.0897s0044 10.0kb upstream 10.0kb upstream 10000 false Scaffold897: 150232-160231 Capsella grandiflora
Cagra.0897s0044 10.0kb downstream 10.0kb downstream 11608 true Scaffold897: 160232-171839 Capsella grandiflora
Cagra.0897s0044 10.0kb downstream 10.0kb downstream 10000 false Scaffold897: 161840-171839 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363627 5261 Brassicaceae View MSA
123833281 5264 Brassicales-Malvales View MSA
124340089 5266 SBM View MSA
124250927 5268 Malvidae View MSA
124071131 5270 Rosid View MSA
123740161 5271 Pentapetalae View MSA
122791095 5272 Eudicot View MSA
122047719 5273 Angiosperm View MSA
121347355 5274 Embryophyte View MSA
123428249 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain