Gene : Cagra.0952s0011 C. grandiflora v1.1
Defline:  (1 of 8) PTHR16007:SF20 - AMINOTRANSFERASE-LIKE, PLANT MOBILE DOMAIN FAMILY PROTEIN-RELATED Genomic Order:  11
Name:  ? Cagra.0952s0011 Secondary Identifier:  ? PAC:28900750
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0952s0011 0.5kb upstream 0.5kb upstream 2138 true Scaffold952: 64236-66373 Capsella grandiflora
Cagra.0952s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold952: 65874-66373 Capsella grandiflora
Cagra.0952s0011 0.5kb downstream 0.5kb downstream 2138 true Scaffold952: 63736-65873 Capsella grandiflora
Cagra.0952s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold952: 63736-64235 Capsella grandiflora
Cagra.0952s0011 1.0kb upstream 1.0kb upstream 2638 true Scaffold952: 64236-66873 Capsella grandiflora
Cagra.0952s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold952: 65874-66873 Capsella grandiflora
Cagra.0952s0011 1.0kb downstream 1.0kb downstream 2638 true Scaffold952: 63236-65873 Capsella grandiflora
Cagra.0952s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold952: 63236-64235 Capsella grandiflora
Cagra.0952s0011 2.0kb upstream 2.0kb upstream 3638 true Scaffold952: 64236-67873 Capsella grandiflora
Cagra.0952s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold952: 65874-67873 Capsella grandiflora
Cagra.0952s0011 2.0kb downstream 2.0kb downstream 3638 true Scaffold952: 62236-65873 Capsella grandiflora
Cagra.0952s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold952: 62236-64235 Capsella grandiflora
Cagra.0952s0011 5.0kb upstream 5.0kb upstream 6638 true Scaffold952: 64236-70873 Capsella grandiflora
Cagra.0952s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold952: 65874-70873 Capsella grandiflora
Cagra.0952s0011 5.0kb downstream 5.0kb downstream 6638 true Scaffold952: 59236-65873 Capsella grandiflora
Cagra.0952s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold952: 59236-64235 Capsella grandiflora
Cagra.0952s0011 10.0kb upstream 10.0kb upstream 11638 true Scaffold952: 64236-75873 Capsella grandiflora
Cagra.0952s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold952: 65874-75873 Capsella grandiflora
Cagra.0952s0011 10.0kb downstream 10.0kb downstream 11638 true Scaffold952: 54236-65873 Capsella grandiflora
Cagra.0952s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold952: 54236-64235 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027649 5273 Angiosperm View MSA
122338747 5261 Brassicaceae View MSA
123779296 5264 Brassicales-Malvales View MSA
124277624 5266 SBM View MSA
124132811 5268 Malvidae View MSA
124071323 5270 Rosid View MSA
123752946 5271 Pentapetalae View MSA
122774876 5272 Eudicot View MSA
121297275 5274 Embryophyte View MSA
123335348 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain