Gene : Cagra.6133s0004 C. grandiflora v1.1
Defline:  (1 of 8) PTHR27000:SF52 - LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN-RELATED Genomic Order:  4
Name:  ? Cagra.6133s0004 Secondary Identifier:  ? PAC:28918571
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6133s0004 0.5kb upstream 0.5kb upstream 1937 true Scaffold6133: 7931-9867 Capsella grandiflora
Cagra.6133s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold6133: 9368-9867 Capsella grandiflora
Cagra.6133s0004 0.5kb downstream 0.5kb downstream 1937 true Scaffold6133: 7431-9367 Capsella grandiflora
Cagra.6133s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold6133: 7431-7930 Capsella grandiflora
Cagra.6133s0004 1.0kb upstream 1.0kb upstream 2437 true Scaffold6133: 7931-10367 Capsella grandiflora
Cagra.6133s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold6133: 9368-10367 Capsella grandiflora
Cagra.6133s0004 1.0kb downstream 1.0kb downstream 2437 true Scaffold6133: 6931-9367 Capsella grandiflora
Cagra.6133s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold6133: 6931-7930 Capsella grandiflora
Cagra.6133s0004 2.0kb upstream 2.0kb upstream 3437 true Scaffold6133: 7931-11367 Capsella grandiflora
Cagra.6133s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold6133: 9368-11367 Capsella grandiflora
Cagra.6133s0004 2.0kb downstream 2.0kb downstream 3437 true Scaffold6133: 5931-9367 Capsella grandiflora
Cagra.6133s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold6133: 5931-7930 Capsella grandiflora
Cagra.6133s0004 5.0kb upstream 5.0kb upstream 6437 true Scaffold6133: 7931-14367 Capsella grandiflora
Cagra.6133s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold6133: 9368-14367 Capsella grandiflora
Cagra.6133s0004 5.0kb downstream 5.0kb downstream 6437 true Scaffold6133: 2931-9367 Capsella grandiflora
Cagra.6133s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold6133: 2931-7930 Capsella grandiflora
Cagra.6133s0004 10.0kb upstream 10.0kb upstream 11437 true Scaffold6133: 7931-19367 Capsella grandiflora
Cagra.6133s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold6133: 9368-19367 Capsella grandiflora
Cagra.6133s0004 10.0kb downstream 10.0kb downstream 9367 true Scaffold6133: 1-9367 Capsella grandiflora
Cagra.6133s0004 10.0kb downstream 10.0kb downstream 7930 false Scaffold6133: 1-7930 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381289 5261 Brassicaceae View MSA
123831536 5264 Brassicales-Malvales View MSA
124336530 5266 SBM View MSA
124237636 5268 Malvidae View MSA
124071295 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain