Gene : Cagra.6160s0007 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31100:SF5 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 29-RELATED Genomic Order:  7
Name:  ? Cagra.6160s0007 Secondary Identifier:  ? PAC:28912746
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6160s0007 0.5kb upstream 0.5kb upstream 1460 true Scaffold6160: 34310-35769 Capsella grandiflora
Cagra.6160s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold6160: 35270-35769 Capsella grandiflora
Cagra.6160s0007 0.5kb downstream 0.5kb downstream 1460 true Scaffold6160: 33810-35269 Capsella grandiflora
Cagra.6160s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold6160: 33810-34309 Capsella grandiflora
Cagra.6160s0007 1.0kb upstream 1.0kb upstream 1960 true Scaffold6160: 34310-36269 Capsella grandiflora
Cagra.6160s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold6160: 35270-36269 Capsella grandiflora
Cagra.6160s0007 1.0kb downstream 1.0kb downstream 1960 true Scaffold6160: 33310-35269 Capsella grandiflora
Cagra.6160s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold6160: 33310-34309 Capsella grandiflora
Cagra.6160s0007 2.0kb upstream 2.0kb upstream 2960 true Scaffold6160: 34310-37269 Capsella grandiflora
Cagra.6160s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold6160: 35270-37269 Capsella grandiflora
Cagra.6160s0007 2.0kb downstream 2.0kb downstream 2960 true Scaffold6160: 32310-35269 Capsella grandiflora
Cagra.6160s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold6160: 32310-34309 Capsella grandiflora
Cagra.6160s0007 5.0kb upstream 5.0kb upstream 5960 true Scaffold6160: 34310-40269 Capsella grandiflora
Cagra.6160s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold6160: 35270-40269 Capsella grandiflora
Cagra.6160s0007 5.0kb downstream 5.0kb downstream 5960 true Scaffold6160: 29310-35269 Capsella grandiflora
Cagra.6160s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold6160: 29310-34309 Capsella grandiflora
Cagra.6160s0007 10.0kb upstream 10.0kb upstream 10960 true Scaffold6160: 34310-45269 Capsella grandiflora
Cagra.6160s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold6160: 35270-45269 Capsella grandiflora
Cagra.6160s0007 10.0kb downstream 10.0kb downstream 10960 true Scaffold6160: 24310-35269 Capsella grandiflora
Cagra.6160s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold6160: 24310-34309 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370774 5261 Brassicaceae View MSA
123839687 5264 Brassicales-Malvales View MSA
124337593 5266 SBM View MSA
124244739 5268 Malvidae View MSA
124072803 5270 Rosid View MSA
123751689 5271 Pentapetalae View MSA
122796160 5272 Eudicot View MSA
122048201 5273 Angiosperm View MSA
121348557 5274 Embryophyte View MSA
123380913 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain