Gene : Cagra.0993s0039 C. grandiflora v1.1
Defline:  (1 of 2) PTHR33493:SF6 - LEA D113 HOMOLOGUE TYPE2-RELATED Genomic Order:  39
Name:  ? Cagra.0993s0039 Secondary Identifier:  ? PAC:28903397
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0993s0039 0.5kb upstream 0.5kb upstream 794 true Scaffold993: 130194-130987 Capsella grandiflora
Cagra.0993s0039 0.5kb upstream 0.5kb upstream 500 false Scaffold993: 130488-130987 Capsella grandiflora
Cagra.0993s0039 0.5kb downstream 0.5kb downstream 794 true Scaffold993: 129694-130487 Capsella grandiflora
Cagra.0993s0039 0.5kb downstream 0.5kb downstream 500 false Scaffold993: 129694-130193 Capsella grandiflora
Cagra.0993s0039 1.0kb upstream 1.0kb upstream 1294 true Scaffold993: 130194-131487 Capsella grandiflora
Cagra.0993s0039 1.0kb upstream 1.0kb upstream 1000 false Scaffold993: 130488-131487 Capsella grandiflora
Cagra.0993s0039 1.0kb downstream 1.0kb downstream 1294 true Scaffold993: 129194-130487 Capsella grandiflora
Cagra.0993s0039 1.0kb downstream 1.0kb downstream 1000 false Scaffold993: 129194-130193 Capsella grandiflora
Cagra.0993s0039 2.0kb upstream 2.0kb upstream 2294 true Scaffold993: 130194-132487 Capsella grandiflora
Cagra.0993s0039 2.0kb upstream 2.0kb upstream 2000 false Scaffold993: 130488-132487 Capsella grandiflora
Cagra.0993s0039 2.0kb downstream 2.0kb downstream 2294 true Scaffold993: 128194-130487 Capsella grandiflora
Cagra.0993s0039 2.0kb downstream 2.0kb downstream 2000 false Scaffold993: 128194-130193 Capsella grandiflora
Cagra.0993s0039 5.0kb upstream 5.0kb upstream 5294 true Scaffold993: 130194-135487 Capsella grandiflora
Cagra.0993s0039 5.0kb upstream 5.0kb upstream 5000 false Scaffold993: 130488-135487 Capsella grandiflora
Cagra.0993s0039 5.0kb downstream 5.0kb downstream 5294 true Scaffold993: 125194-130487 Capsella grandiflora
Cagra.0993s0039 5.0kb downstream 5.0kb downstream 5000 false Scaffold993: 125194-130193 Capsella grandiflora
Cagra.0993s0039 10.0kb upstream 10.0kb upstream 10294 true Scaffold993: 130194-140487 Capsella grandiflora
Cagra.0993s0039 10.0kb upstream 10.0kb upstream 10000 false Scaffold993: 130488-140487 Capsella grandiflora
Cagra.0993s0039 10.0kb downstream 10.0kb downstream 10294 true Scaffold993: 120194-130487 Capsella grandiflora
Cagra.0993s0039 10.0kb downstream 10.0kb downstream 10000 false Scaffold993: 120194-130193 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041492 5273 Angiosperm View MSA
122369298 5261 Brassicaceae View MSA
123841580 5264 Brassicales-Malvales View MSA
124343047 5266 SBM View MSA
124244519 5268 Malvidae View MSA
124069755 5270 Rosid View MSA
123747649 5271 Pentapetalae View MSA
122796775 5272 Eudicot View MSA
121309859 5274 Embryophyte View MSA
123347503 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain