Gene : Cagra.6989s0001 C. grandiflora v1.1
Defline:  (1 of 25) PF02902 - Ulp1 protease family, C-terminal catalytic domain (Peptidase_C48) Genomic Order:  1
Name:  ? Cagra.6989s0001 Secondary Identifier:  ? PAC:28894641
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6989s0001 0.5kb upstream 0.5kb upstream 1121 true Scaffold6989: 4286-5406 Capsella grandiflora
Cagra.6989s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold6989: 4907-5406 Capsella grandiflora
Cagra.6989s0001 0.5kb downstream 0.5kb downstream 1121 true Scaffold6989: 3786-4906 Capsella grandiflora
Cagra.6989s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold6989: 3786-4285 Capsella grandiflora
Cagra.6989s0001 1.0kb upstream 1.0kb upstream 1621 true Scaffold6989: 4286-5906 Capsella grandiflora
Cagra.6989s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold6989: 4907-5906 Capsella grandiflora
Cagra.6989s0001 1.0kb downstream 1.0kb downstream 1621 true Scaffold6989: 3286-4906 Capsella grandiflora
Cagra.6989s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold6989: 3286-4285 Capsella grandiflora
Cagra.6989s0001 2.0kb upstream 2.0kb upstream 2621 true Scaffold6989: 4286-6906 Capsella grandiflora
Cagra.6989s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold6989: 4907-6906 Capsella grandiflora
Cagra.6989s0001 2.0kb downstream 2.0kb downstream 2621 true Scaffold6989: 2286-4906 Capsella grandiflora
Cagra.6989s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold6989: 2286-4285 Capsella grandiflora
Cagra.6989s0001 5.0kb upstream 5.0kb upstream 5621 true Scaffold6989: 4286-9906 Capsella grandiflora
Cagra.6989s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold6989: 4907-9906 Capsella grandiflora
Cagra.6989s0001 5.0kb downstream 5.0kb downstream 4906 true Scaffold6989: 1-4906 Capsella grandiflora
Cagra.6989s0001 5.0kb downstream 5.0kb downstream 4285 false Scaffold6989: 1-4285 Capsella grandiflora
Cagra.6989s0001 10.0kb upstream 10.0kb upstream 7658 true Scaffold6989: 4286-11943 Capsella grandiflora
Cagra.6989s0001 10.0kb upstream 10.0kb upstream 7037 false Scaffold6989: 4907-11943 Capsella grandiflora
Cagra.6989s0001 10.0kb downstream 10.0kb downstream 4906 true Scaffold6989: 1-4906 Capsella grandiflora
Cagra.6989s0001 10.0kb downstream 10.0kb downstream 4285 false Scaffold6989: 1-4285 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121512404 5273 Angiosperm View MSA
122381746 5261 Brassicaceae View MSA
123803415 5264 Brassicales-Malvales View MSA
124300527 5266 SBM View MSA
124151694 5268 Malvidae View MSA
123877078 5270 Rosid View MSA
123460658 5271 Pentapetalae View MSA
122496025 5272 Eudicot View MSA
120785425 5274 Embryophyte View MSA
122827291 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain