Gene : Cagra.8559s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31190:SF15 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B Genomic Order:  1
Name:  ? Cagra.8559s0001 Secondary Identifier:  ? PAC:28905326
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8559s0001 0.5kb upstream 0.5kb upstream 1187 true Scaffold8559: 9987-11173 Capsella grandiflora
Cagra.8559s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold8559: 10674-11173 Capsella grandiflora
Cagra.8559s0001 0.5kb downstream 0.5kb downstream 1187 true Scaffold8559: 9487-10673 Capsella grandiflora
Cagra.8559s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold8559: 9487-9986 Capsella grandiflora
Cagra.8559s0001 1.0kb upstream 1.0kb upstream 1687 true Scaffold8559: 9987-11673 Capsella grandiflora
Cagra.8559s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold8559: 10674-11673 Capsella grandiflora
Cagra.8559s0001 1.0kb downstream 1.0kb downstream 1687 true Scaffold8559: 8987-10673 Capsella grandiflora
Cagra.8559s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold8559: 8987-9986 Capsella grandiflora
Cagra.8559s0001 2.0kb upstream 2.0kb upstream 2687 true Scaffold8559: 9987-12673 Capsella grandiflora
Cagra.8559s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold8559: 10674-12673 Capsella grandiflora
Cagra.8559s0001 2.0kb downstream 2.0kb downstream 2687 true Scaffold8559: 7987-10673 Capsella grandiflora
Cagra.8559s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold8559: 7987-9986 Capsella grandiflora
Cagra.8559s0001 5.0kb upstream 5.0kb upstream 5687 true Scaffold8559: 9987-15673 Capsella grandiflora
Cagra.8559s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold8559: 10674-15673 Capsella grandiflora
Cagra.8559s0001 5.0kb downstream 5.0kb downstream 5687 true Scaffold8559: 4987-10673 Capsella grandiflora
Cagra.8559s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold8559: 4987-9986 Capsella grandiflora
Cagra.8559s0001 10.0kb upstream 10.0kb upstream 8510 true Scaffold8559: 9987-18496 Capsella grandiflora
Cagra.8559s0001 10.0kb upstream 10.0kb upstream 7823 false Scaffold8559: 10674-18496 Capsella grandiflora
Cagra.8559s0001 10.0kb downstream 10.0kb downstream 10673 true Scaffold8559: 1-10673 Capsella grandiflora
Cagra.8559s0001 10.0kb downstream 10.0kb downstream 9986 false Scaffold8559: 1-9986 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373610 5261 Brassicaceae View MSA
123838461 5264 Brassicales-Malvales View MSA
124342240 5266 SBM View MSA
124249998 5268 Malvidae View MSA
124074692 5270 Rosid View MSA
123751069 5271 Pentapetalae View MSA
122793913 5272 Eudicot View MSA
122046946 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain