Gene : Cagra.8879s0002 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31614:SF5 - ALLERGEN-LIKE PROTEIN BRSN20-RELATED Genomic Order:  2
Name:  ? Cagra.8879s0002 Secondary Identifier:  ? PAC:28917412
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8879s0002 0.5kb upstream 0.5kb upstream 328 true Scaffold8879: 1302-1629 Capsella grandiflora
Cagra.8879s0002 0.5kb upstream 0.5kb upstream 40 false Scaffold8879: 1590-1629 Capsella grandiflora
Cagra.8879s0002 0.5kb downstream 0.5kb downstream 788 true Scaffold8879: 802-1589 Capsella grandiflora
Cagra.8879s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold8879: 802-1301 Capsella grandiflora
Cagra.8879s0002 1.0kb upstream 1.0kb upstream 328 true Scaffold8879: 1302-1629 Capsella grandiflora
Cagra.8879s0002 1.0kb upstream 1.0kb upstream 40 false Scaffold8879: 1590-1629 Capsella grandiflora
Cagra.8879s0002 1.0kb downstream 1.0kb downstream 1288 true Scaffold8879: 302-1589 Capsella grandiflora
Cagra.8879s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold8879: 302-1301 Capsella grandiflora
Cagra.8879s0002 2.0kb upstream 2.0kb upstream 328 true Scaffold8879: 1302-1629 Capsella grandiflora
Cagra.8879s0002 2.0kb upstream 2.0kb upstream 40 false Scaffold8879: 1590-1629 Capsella grandiflora
Cagra.8879s0002 2.0kb downstream 2.0kb downstream 1589 true Scaffold8879: 1-1589 Capsella grandiflora
Cagra.8879s0002 2.0kb downstream 2.0kb downstream 1301 false Scaffold8879: 1-1301 Capsella grandiflora
Cagra.8879s0002 5.0kb upstream 5.0kb upstream 328 true Scaffold8879: 1302-1629 Capsella grandiflora
Cagra.8879s0002 5.0kb upstream 5.0kb upstream 40 false Scaffold8879: 1590-1629 Capsella grandiflora
Cagra.8879s0002 5.0kb downstream 5.0kb downstream 1589 true Scaffold8879: 1-1589 Capsella grandiflora
Cagra.8879s0002 5.0kb downstream 5.0kb downstream 1301 false Scaffold8879: 1-1301 Capsella grandiflora
Cagra.8879s0002 10.0kb upstream 10.0kb upstream 328 true Scaffold8879: 1302-1629 Capsella grandiflora
Cagra.8879s0002 10.0kb upstream 10.0kb upstream 40 false Scaffold8879: 1590-1629 Capsella grandiflora
Cagra.8879s0002 10.0kb downstream 10.0kb downstream 1589 true Scaffold8879: 1-1589 Capsella grandiflora
Cagra.8879s0002 10.0kb downstream 10.0kb downstream 1301 false Scaffold8879: 1-1301 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029818 5273 Angiosperm View MSA
122338268 5261 Brassicaceae View MSA
123778866 5264 Brassicales-Malvales View MSA
124277203 5266 SBM View MSA
124240611 5268 Malvidae View MSA
124038312 5270 Rosid View MSA
123610749 5271 Pentapetalae View MSA
122645341 5272 Eudicot View MSA
121299092 5274 Embryophyte View MSA
123337011 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain