Gene : Cagra.9005s0001 C. grandiflora v1.1
Defline:  (1 of 17) PF14111//PF14392 - Domain of unknown function (DUF4283) (DUF4283) // Zinc knuckle (zf-CCHC_4) Genomic Order:  1
Name:  ? Cagra.9005s0001 Secondary Identifier:  ? PAC:28901293
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9005s0001 0.5kb upstream 0.5kb upstream 1579 true Scaffold9005: 1-1579 Capsella grandiflora
Cagra.9005s0001 0.5kb upstream 0.5kb upstream 151 false Scaffold9005: 1-151 Capsella grandiflora
Cagra.9005s0001 0.5kb downstream 0.5kb downstream 1928 true Scaffold9005: 152-2079 Capsella grandiflora
Cagra.9005s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold9005: 1580-2079 Capsella grandiflora
Cagra.9005s0001 1.0kb upstream 1.0kb upstream 1579 true Scaffold9005: 1-1579 Capsella grandiflora
Cagra.9005s0001 1.0kb upstream 1.0kb upstream 151 false Scaffold9005: 1-151 Capsella grandiflora
Cagra.9005s0001 1.0kb downstream 1.0kb downstream 2428 true Scaffold9005: 152-2579 Capsella grandiflora
Cagra.9005s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold9005: 1580-2579 Capsella grandiflora
Cagra.9005s0001 2.0kb upstream 2.0kb upstream 1579 true Scaffold9005: 1-1579 Capsella grandiflora
Cagra.9005s0001 2.0kb upstream 2.0kb upstream 151 false Scaffold9005: 1-151 Capsella grandiflora
Cagra.9005s0001 2.0kb downstream 2.0kb downstream 3428 true Scaffold9005: 152-3579 Capsella grandiflora
Cagra.9005s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold9005: 1580-3579 Capsella grandiflora
Cagra.9005s0001 5.0kb upstream 5.0kb upstream 1579 true Scaffold9005: 1-1579 Capsella grandiflora
Cagra.9005s0001 5.0kb upstream 5.0kb upstream 151 false Scaffold9005: 1-151 Capsella grandiflora
Cagra.9005s0001 5.0kb downstream 5.0kb downstream 6428 true Scaffold9005: 152-6579 Capsella grandiflora
Cagra.9005s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold9005: 1580-6579 Capsella grandiflora
Cagra.9005s0001 10.0kb upstream 10.0kb upstream 1579 true Scaffold9005: 1-1579 Capsella grandiflora
Cagra.9005s0001 10.0kb upstream 10.0kb upstream 151 false Scaffold9005: 1-151 Capsella grandiflora
Cagra.9005s0001 10.0kb downstream 10.0kb downstream 11428 true Scaffold9005: 152-11579 Capsella grandiflora
Cagra.9005s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold9005: 1580-11579 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380346 5261 Brassicaceae View MSA
123802664 5264 Brassicales-Malvales View MSA
124299840 5266 SBM View MSA
124151152 5268 Malvidae View MSA
124051495 5270 Rosid View MSA
123753554 5271 Pentapetalae View MSA
122797941 5272 Eudicot View MSA
122051690 5273 Angiosperm View MSA
121351675 5274 Embryophyte View MSA
123428354 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain