Gene : Cagra.9070s0001 C. grandiflora v1.1
Defline:  (1 of 3) KOG1595 - CCCH-type Zn-finger protein Genomic Order:  1
Name:  ? Cagra.9070s0001 Secondary Identifier:  ? PAC:28909125
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9070s0001 0.5kb upstream 0.5kb upstream 1895 true Scaffold9070: 1701-3595 Capsella grandiflora
Cagra.9070s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold9070: 1701-2200 Capsella grandiflora
Cagra.9070s0001 0.5kb downstream 0.5kb downstream 1895 true Scaffold9070: 2201-4095 Capsella grandiflora
Cagra.9070s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold9070: 3596-4095 Capsella grandiflora
Cagra.9070s0001 1.0kb upstream 1.0kb upstream 2395 true Scaffold9070: 1201-3595 Capsella grandiflora
Cagra.9070s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold9070: 1201-2200 Capsella grandiflora
Cagra.9070s0001 1.0kb downstream 1.0kb downstream 2395 true Scaffold9070: 2201-4595 Capsella grandiflora
Cagra.9070s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold9070: 3596-4595 Capsella grandiflora
Cagra.9070s0001 2.0kb upstream 2.0kb upstream 3395 true Scaffold9070: 201-3595 Capsella grandiflora
Cagra.9070s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold9070: 201-2200 Capsella grandiflora
Cagra.9070s0001 2.0kb downstream 2.0kb downstream 3395 true Scaffold9070: 2201-5595 Capsella grandiflora
Cagra.9070s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold9070: 3596-5595 Capsella grandiflora
Cagra.9070s0001 5.0kb upstream 5.0kb upstream 3595 true Scaffold9070: 1-3595 Capsella grandiflora
Cagra.9070s0001 5.0kb upstream 5.0kb upstream 2200 false Scaffold9070: 1-2200 Capsella grandiflora
Cagra.9070s0001 5.0kb downstream 5.0kb downstream 6395 true Scaffold9070: 2201-8595 Capsella grandiflora
Cagra.9070s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold9070: 3596-8595 Capsella grandiflora
Cagra.9070s0001 10.0kb upstream 10.0kb upstream 3595 true Scaffold9070: 1-3595 Capsella grandiflora
Cagra.9070s0001 10.0kb upstream 10.0kb upstream 2200 false Scaffold9070: 1-2200 Capsella grandiflora
Cagra.9070s0001 10.0kb downstream 10.0kb downstream 11395 true Scaffold9070: 2201-13595 Capsella grandiflora
Cagra.9070s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold9070: 3596-13595 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369475 5261 Brassicaceae View MSA
123841324 5264 Brassicales-Malvales View MSA
124344801 5266 SBM View MSA
124248474 5268 Malvidae View MSA
124070432 5270 Rosid View MSA
123751061 5271 Pentapetalae View MSA
122788502 5272 Eudicot View MSA
122046777 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain