Gene : Cagra.9536s0016 C. grandiflora v1.1
Defline:  (1 of 25) PF07333 - S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) (SLR1-BP) Genomic Order:  16
Name:  ? Cagra.9536s0016 Secondary Identifier:  ? PAC:28896606
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9536s0016 0.5kb upstream 0.5kb upstream 707 true Scaffold9536: 54921-55627 Capsella grandiflora
Cagra.9536s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold9536: 55128-55627 Capsella grandiflora
Cagra.9536s0016 0.5kb downstream 0.5kb downstream 707 true Scaffold9536: 54421-55127 Capsella grandiflora
Cagra.9536s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold9536: 54421-54920 Capsella grandiflora
Cagra.9536s0016 1.0kb upstream 1.0kb upstream 1207 true Scaffold9536: 54921-56127 Capsella grandiflora
Cagra.9536s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold9536: 55128-56127 Capsella grandiflora
Cagra.9536s0016 1.0kb downstream 1.0kb downstream 1207 true Scaffold9536: 53921-55127 Capsella grandiflora
Cagra.9536s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold9536: 53921-54920 Capsella grandiflora
Cagra.9536s0016 2.0kb upstream 2.0kb upstream 2207 true Scaffold9536: 54921-57127 Capsella grandiflora
Cagra.9536s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold9536: 55128-57127 Capsella grandiflora
Cagra.9536s0016 2.0kb downstream 2.0kb downstream 2207 true Scaffold9536: 52921-55127 Capsella grandiflora
Cagra.9536s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold9536: 52921-54920 Capsella grandiflora
Cagra.9536s0016 5.0kb upstream 5.0kb upstream 5207 true Scaffold9536: 54921-60127 Capsella grandiflora
Cagra.9536s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold9536: 55128-60127 Capsella grandiflora
Cagra.9536s0016 5.0kb downstream 5.0kb downstream 5207 true Scaffold9536: 49921-55127 Capsella grandiflora
Cagra.9536s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold9536: 49921-54920 Capsella grandiflora
Cagra.9536s0016 10.0kb upstream 10.0kb upstream 10207 true Scaffold9536: 54921-65127 Capsella grandiflora
Cagra.9536s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold9536: 55128-65127 Capsella grandiflora
Cagra.9536s0016 10.0kb downstream 10.0kb downstream 10207 true Scaffold9536: 44921-55127 Capsella grandiflora
Cagra.9536s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold9536: 44921-54920 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121499618 5273 Angiosperm View MSA
122338396 5261 Brassicaceae View MSA
123778974 5264 Brassicales-Malvales View MSA
124277308 5266 SBM View MSA
124132523 5268 Malvidae View MSA
123860815 5270 Rosid View MSA
123446402 5271 Pentapetalae View MSA
122481953 5272 Eudicot View MSA
120772956 5274 Embryophyte View MSA
122815284 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain