Gene : MD17G1197100 M. domestica v1.1

Defline:  (1 of 20) 2.3.1.133 - Shikimate O-hydroxycinnamoyltransferase Genomic Order:  1705
Name:  ? MD17G1197100 Secondary Identifier:  ? PAC:40124792

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mdomestica PWY-361 Malus domestica pathologic  
Mdomestica PWY-6040 Malus domestica pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
MD17G1197100 0.5kb upstream 0.5kb upstream 1868 true Chr17: 23621809-23623676 Malus domestica
MD17G1197100 0.5kb upstream 0.5kb upstream 500 false Chr17: 23621809-23622308 Malus domestica
MD17G1197100 0.5kb downstream 0.5kb downstream 1868 true Chr17: 23622309-23624176 Malus domestica
MD17G1197100 0.5kb downstream 0.5kb downstream 500 false Chr17: 23623677-23624176 Malus domestica
MD17G1197100 1.0kb upstream 1.0kb upstream 2368 true Chr17: 23621309-23623676 Malus domestica
MD17G1197100 1.0kb upstream 1.0kb upstream 1000 false Chr17: 23621309-23622308 Malus domestica
MD17G1197100 1.0kb downstream 1.0kb downstream 2368 true Chr17: 23622309-23624676 Malus domestica
MD17G1197100 1.0kb downstream 1.0kb downstream 1000 false Chr17: 23623677-23624676 Malus domestica
MD17G1197100 2.0kb upstream 2.0kb upstream 3368 true Chr17: 23620309-23623676 Malus domestica
MD17G1197100 2.0kb upstream 2.0kb upstream 2000 false Chr17: 23620309-23622308 Malus domestica
MD17G1197100 2.0kb downstream 2.0kb downstream 3368 true Chr17: 23622309-23625676 Malus domestica
MD17G1197100 2.0kb downstream 2.0kb downstream 2000 false Chr17: 23623677-23625676 Malus domestica
MD17G1197100 5.0kb upstream 5.0kb upstream 6368 true Chr17: 23617309-23623676 Malus domestica
MD17G1197100 5.0kb upstream 5.0kb upstream 5000 false Chr17: 23617309-23622308 Malus domestica
MD17G1197100 5.0kb downstream 5.0kb downstream 6368 true Chr17: 23622309-23628676 Malus domestica
MD17G1197100 5.0kb downstream 5.0kb downstream 5000 false Chr17: 23623677-23628676 Malus domestica
MD17G1197100 10.0kb upstream 10.0kb upstream 11368 true Chr17: 23612309-23623676 Malus domestica
MD17G1197100 10.0kb upstream 10.0kb upstream 10000 false Chr17: 23612309-23622308 Malus domestica
MD17G1197100 10.0kb downstream 10.0kb downstream 11368 true Chr17: 23622309-23633676 Malus domestica
MD17G1197100 10.0kb downstream 10.0kb downstream 10000 false Chr17: 23623677-23633676 Malus domestica

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314252 5265 Fabidae View MSA
124061050 5270 Rosid View MSA
123747860 5271 Pentapetalae View MSA
122791254 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain