Gene : MD17G1229400 M. domestica v1.1
Defline:  (1 of 2) PTHR24096//PTHR24096:SF149 - FAMILY NOT NAMED // 4-COUMARATE--COA LIGASE 1-RELATED Genomic Order:  1973
Name:  ? MD17G1229400 Secondary Identifier:  ? PAC:40125127
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mdomestica PWY-1121 Malus domestica pathologic  
Mdomestica PWY1F-FLAVSYN Malus domestica pathologic  
Mdomestica PWY-361 Malus domestica pathologic  
Mdomestica PWY-6435 Malus domestica pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
MD17G1229400 0.5kb upstream 0.5kb upstream 6232 true Chr17: 27737296-27743527 Malus domestica
MD17G1229400 0.5kb upstream 0.5kb upstream 500 false Chr17: 27737296-27737795 Malus domestica
MD17G1229400 0.5kb downstream 0.5kb downstream 6232 true Chr17: 27737796-27744027 Malus domestica
MD17G1229400 0.5kb downstream 0.5kb downstream 500 false Chr17: 27743528-27744027 Malus domestica
MD17G1229400 1.0kb upstream 1.0kb upstream 6732 true Chr17: 27736796-27743527 Malus domestica
MD17G1229400 1.0kb upstream 1.0kb upstream 1000 false Chr17: 27736796-27737795 Malus domestica
MD17G1229400 1.0kb downstream 1.0kb downstream 6732 true Chr17: 27737796-27744527 Malus domestica
MD17G1229400 1.0kb downstream 1.0kb downstream 1000 false Chr17: 27743528-27744527 Malus domestica
MD17G1229400 2.0kb upstream 2.0kb upstream 7732 true Chr17: 27735796-27743527 Malus domestica
MD17G1229400 2.0kb upstream 2.0kb upstream 2000 false Chr17: 27735796-27737795 Malus domestica
MD17G1229400 2.0kb downstream 2.0kb downstream 7732 true Chr17: 27737796-27745527 Malus domestica
MD17G1229400 2.0kb downstream 2.0kb downstream 2000 false Chr17: 27743528-27745527 Malus domestica
MD17G1229400 5.0kb upstream 5.0kb upstream 10732 true Chr17: 27732796-27743527 Malus domestica
MD17G1229400 5.0kb upstream 5.0kb upstream 5000 false Chr17: 27732796-27737795 Malus domestica
MD17G1229400 5.0kb downstream 5.0kb downstream 10732 true Chr17: 27737796-27748527 Malus domestica
MD17G1229400 5.0kb downstream 5.0kb downstream 5000 false Chr17: 27743528-27748527 Malus domestica
MD17G1229400 10.0kb upstream 10.0kb upstream 15732 true Chr17: 27727796-27743527 Malus domestica
MD17G1229400 10.0kb upstream 10.0kb upstream 10000 false Chr17: 27727796-27737795 Malus domestica
MD17G1229400 10.0kb downstream 10.0kb downstream 15732 true Chr17: 27737796-27753527 Malus domestica
MD17G1229400 10.0kb downstream 10.0kb downstream 10000 false Chr17: 27743528-27753527 Malus domestica

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300508 5265 Fabidae View MSA
124064969 5270 Rosid View MSA
123741286 5271 Pentapetalae View MSA
122790673 5272 Eudicot View MSA
122048251 5273 Angiosperm View MSA
121345883 5274 Embryophyte View MSA
123380283 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain