Gene : Ca_17452 C. arietinum v1.0
Defline:  (1 of 1) PTHR10003//PTHR10003:SF34 - SUPEROXIDE DISMUTASE CU-ZN -RELATED // SUPEROXIDE DISMUTASE [CU-ZN] 2, CHLOROPLASTIC Genomic Order:  2386
Name:  ? Ca_17452 Secondary Identifier:  ? PAC:40138254
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Carietinum DETOX1-PWY Cicer arietinum pathologic  
Carietinum DETOX1-PWY-1 Cicer arietinum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_17452 0.5kb upstream 0.5kb upstream 3838 true Ca6: 29244230-29248067 Cicer arietinum
Ca_17452 0.5kb upstream 0.5kb upstream 500 false Ca6: 29244230-29244729 Cicer arietinum
Ca_17452 0.5kb downstream 0.5kb downstream 3838 true Ca6: 29244730-29248567 Cicer arietinum
Ca_17452 0.5kb downstream 0.5kb downstream 500 false Ca6: 29248068-29248567 Cicer arietinum
Ca_17452 1.0kb upstream 1.0kb upstream 4338 true Ca6: 29243730-29248067 Cicer arietinum
Ca_17452 1.0kb upstream 1.0kb upstream 1000 false Ca6: 29243730-29244729 Cicer arietinum
Ca_17452 1.0kb downstream 1.0kb downstream 4338 true Ca6: 29244730-29249067 Cicer arietinum
Ca_17452 1.0kb downstream 1.0kb downstream 1000 false Ca6: 29248068-29249067 Cicer arietinum
Ca_17452 2.0kb upstream 2.0kb upstream 5338 true Ca6: 29242730-29248067 Cicer arietinum
Ca_17452 2.0kb upstream 2.0kb upstream 2000 false Ca6: 29242730-29244729 Cicer arietinum
Ca_17452 2.0kb downstream 2.0kb downstream 5338 true Ca6: 29244730-29250067 Cicer arietinum
Ca_17452 2.0kb downstream 2.0kb downstream 2000 false Ca6: 29248068-29250067 Cicer arietinum
Ca_17452 5.0kb upstream 5.0kb upstream 8338 true Ca6: 29239730-29248067 Cicer arietinum
Ca_17452 5.0kb upstream 5.0kb upstream 5000 false Ca6: 29239730-29244729 Cicer arietinum
Ca_17452 5.0kb downstream 5.0kb downstream 8338 true Ca6: 29244730-29253067 Cicer arietinum
Ca_17452 5.0kb downstream 5.0kb downstream 5000 false Ca6: 29248068-29253067 Cicer arietinum
Ca_17452 10.0kb upstream 10.0kb upstream 13338 true Ca6: 29234730-29248067 Cicer arietinum
Ca_17452 10.0kb upstream 10.0kb upstream 10000 false Ca6: 29234730-29244729 Cicer arietinum
Ca_17452 10.0kb downstream 10.0kb downstream 13338 true Ca6: 29244730-29258067 Cicer arietinum
Ca_17452 10.0kb downstream 10.0kb downstream 10000 false Ca6: 29248068-29258067 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299889 5265 Fabidae View MSA
124067425 5270 Rosid View MSA
123737273 5271 Pentapetalae View MSA
122788875 5272 Eudicot View MSA
122047736 5273 Angiosperm View MSA
121347419 5274 Embryophyte View MSA
123427939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain