Gene : Ca_20248 C. arietinum v1.0
Defline:  (1 of 2) PTHR13301//PTHR13301:SF61 - X-BOX TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2783
Name:  ? Ca_20248 Secondary Identifier:  ? PAC:40141569
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Carietinum PWY-1001 Cicer arietinum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_20248 0.5kb upstream 0.5kb upstream 7477 true Ca7: 40282935-40290411 Cicer arietinum
Ca_20248 0.5kb upstream 0.5kb upstream 500 false Ca7: 40289912-40290411 Cicer arietinum
Ca_20248 0.5kb downstream 0.5kb downstream 7477 true Ca7: 40282435-40289911 Cicer arietinum
Ca_20248 0.5kb downstream 0.5kb downstream 500 false Ca7: 40282435-40282934 Cicer arietinum
Ca_20248 1.0kb upstream 1.0kb upstream 7977 true Ca7: 40282935-40290911 Cicer arietinum
Ca_20248 1.0kb upstream 1.0kb upstream 1000 false Ca7: 40289912-40290911 Cicer arietinum
Ca_20248 1.0kb downstream 1.0kb downstream 7977 true Ca7: 40281935-40289911 Cicer arietinum
Ca_20248 1.0kb downstream 1.0kb downstream 1000 false Ca7: 40281935-40282934 Cicer arietinum
Ca_20248 2.0kb upstream 2.0kb upstream 8977 true Ca7: 40282935-40291911 Cicer arietinum
Ca_20248 2.0kb upstream 2.0kb upstream 2000 false Ca7: 40289912-40291911 Cicer arietinum
Ca_20248 2.0kb downstream 2.0kb downstream 8977 true Ca7: 40280935-40289911 Cicer arietinum
Ca_20248 2.0kb downstream 2.0kb downstream 2000 false Ca7: 40280935-40282934 Cicer arietinum
Ca_20248 5.0kb upstream 5.0kb upstream 11977 true Ca7: 40282935-40294911 Cicer arietinum
Ca_20248 5.0kb upstream 5.0kb upstream 5000 false Ca7: 40289912-40294911 Cicer arietinum
Ca_20248 5.0kb downstream 5.0kb downstream 11977 true Ca7: 40277935-40289911 Cicer arietinum
Ca_20248 5.0kb downstream 5.0kb downstream 5000 false Ca7: 40277935-40282934 Cicer arietinum
Ca_20248 10.0kb upstream 10.0kb upstream 16977 true Ca7: 40282935-40299911 Cicer arietinum
Ca_20248 10.0kb upstream 10.0kb upstream 10000 false Ca7: 40289912-40299911 Cicer arietinum
Ca_20248 10.0kb downstream 10.0kb downstream 16977 true Ca7: 40272935-40289911 Cicer arietinum
Ca_20248 10.0kb downstream 10.0kb downstream 10000 false Ca7: 40272935-40282934 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314851 5265 Fabidae View MSA
124068602 5270 Rosid View MSA
123746424 5271 Pentapetalae View MSA
122793475 5272 Eudicot View MSA
122046929 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain