Gene : Ca_11890 C. arietinum v1.0
Defline:  (1 of 1) PTHR10314//PTHR10314:SF123 - SER/THR DEHYDRATASE, TRP SYNTHASE // TRYPTOPHAN SYNTHASE BETA CHAIN-LIKE PROTEIN Genomic Order:  48
Name:  ? Ca_11890 Secondary Identifier:  ? PAC:40153208
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Carietinum TRPSYN-PWY Cicer arietinum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_11890 0.5kb upstream 0.5kb upstream 2802 true Ca8: 444899-447700 Cicer arietinum
Ca_11890 0.5kb upstream 0.5kb upstream 500 false Ca8: 444899-445398 Cicer arietinum
Ca_11890 0.5kb downstream 0.5kb downstream 2802 true Ca8: 445399-448200 Cicer arietinum
Ca_11890 0.5kb downstream 0.5kb downstream 500 false Ca8: 447701-448200 Cicer arietinum
Ca_11890 1.0kb upstream 1.0kb upstream 3302 true Ca8: 444399-447700 Cicer arietinum
Ca_11890 1.0kb upstream 1.0kb upstream 1000 false Ca8: 444399-445398 Cicer arietinum
Ca_11890 1.0kb downstream 1.0kb downstream 3302 true Ca8: 445399-448700 Cicer arietinum
Ca_11890 1.0kb downstream 1.0kb downstream 1000 false Ca8: 447701-448700 Cicer arietinum
Ca_11890 2.0kb upstream 2.0kb upstream 4302 true Ca8: 443399-447700 Cicer arietinum
Ca_11890 2.0kb upstream 2.0kb upstream 2000 false Ca8: 443399-445398 Cicer arietinum
Ca_11890 2.0kb downstream 2.0kb downstream 4302 true Ca8: 445399-449700 Cicer arietinum
Ca_11890 2.0kb downstream 2.0kb downstream 2000 false Ca8: 447701-449700 Cicer arietinum
Ca_11890 5.0kb upstream 5.0kb upstream 7302 true Ca8: 440399-447700 Cicer arietinum
Ca_11890 5.0kb upstream 5.0kb upstream 5000 false Ca8: 440399-445398 Cicer arietinum
Ca_11890 5.0kb downstream 5.0kb downstream 7302 true Ca8: 445399-452700 Cicer arietinum
Ca_11890 5.0kb downstream 5.0kb downstream 5000 false Ca8: 447701-452700 Cicer arietinum
Ca_11890 10.0kb upstream 10.0kb upstream 12302 true Ca8: 435399-447700 Cicer arietinum
Ca_11890 10.0kb upstream 10.0kb upstream 10000 false Ca8: 435399-445398 Cicer arietinum
Ca_11890 10.0kb downstream 10.0kb downstream 12302 true Ca8: 445399-457700 Cicer arietinum
Ca_11890 10.0kb downstream 10.0kb downstream 10000 false Ca8: 447701-457700 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296976 5265 Fabidae View MSA
124062384 5270 Rosid View MSA
123745831 5271 Pentapetalae View MSA
122787401 5272 Eudicot View MSA
122044231 5273 Angiosperm View MSA
121344651 5274 Embryophyte View MSA
123423776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain