Gene : Ca_27227 C. arietinum v1.0

Defline:  (1 of 1) PTHR10024//PTHR10024:SF256 - SYNAPTOTAGMIN // C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN Genomic Order:  2
Name:  ? Ca_27227 Secondary Identifier:  ? PAC:40139070

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_27227 0.5kb upstream 0.5kb upstream 3262 true scaffold353: 51301-54562 Cicer arietinum
Ca_27227 0.5kb upstream 0.5kb upstream 500 false scaffold353: 54063-54562 Cicer arietinum
Ca_27227 0.5kb downstream 0.5kb downstream 3262 true scaffold353: 50801-54062 Cicer arietinum
Ca_27227 0.5kb downstream 0.5kb downstream 500 false scaffold353: 50801-51300 Cicer arietinum
Ca_27227 1.0kb upstream 1.0kb upstream 3762 true scaffold353: 51301-55062 Cicer arietinum
Ca_27227 1.0kb upstream 1.0kb upstream 1000 false scaffold353: 54063-55062 Cicer arietinum
Ca_27227 1.0kb downstream 1.0kb downstream 3762 true scaffold353: 50301-54062 Cicer arietinum
Ca_27227 1.0kb downstream 1.0kb downstream 1000 false scaffold353: 50301-51300 Cicer arietinum
Ca_27227 2.0kb upstream 2.0kb upstream 4762 true scaffold353: 51301-56062 Cicer arietinum
Ca_27227 2.0kb upstream 2.0kb upstream 2000 false scaffold353: 54063-56062 Cicer arietinum
Ca_27227 2.0kb downstream 2.0kb downstream 4762 true scaffold353: 49301-54062 Cicer arietinum
Ca_27227 2.0kb downstream 2.0kb downstream 2000 false scaffold353: 49301-51300 Cicer arietinum
Ca_27227 5.0kb upstream 5.0kb upstream 7762 true scaffold353: 51301-59062 Cicer arietinum
Ca_27227 5.0kb upstream 5.0kb upstream 5000 false scaffold353: 54063-59062 Cicer arietinum
Ca_27227 5.0kb downstream 5.0kb downstream 7762 true scaffold353: 46301-54062 Cicer arietinum
Ca_27227 5.0kb downstream 5.0kb downstream 5000 false scaffold353: 46301-51300 Cicer arietinum
Ca_27227 10.0kb upstream 10.0kb upstream 11103 true scaffold353: 51301-62403 Cicer arietinum
Ca_27227 10.0kb upstream 10.0kb upstream 8341 false scaffold353: 54063-62403 Cicer arietinum
Ca_27227 10.0kb downstream 10.0kb downstream 12762 true scaffold353: 41301-54062 Cicer arietinum
Ca_27227 10.0kb downstream 10.0kb downstream 10000 false scaffold353: 41301-51300 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311480 5265 Fabidae View MSA
124069332 5270 Rosid View MSA
123741936 5271 Pentapetalae View MSA
122796289 5272 Eudicot View MSA
122048920 5273 Angiosperm View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain