Gene : Ca_21937 C. arietinum v1.0

Defline:  (1 of 3) PTHR10183 - CALPAIN Genomic Order:  23
Name:  ? Ca_21937 Secondary Identifier:  ? PAC:40143411

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_21937 0.5kb upstream 0.5kb upstream 5272 true scaffold1943: 385247-390518 Cicer arietinum
Ca_21937 0.5kb upstream 0.5kb upstream 500 false scaffold1943: 390019-390518 Cicer arietinum
Ca_21937 0.5kb downstream 0.5kb downstream 5272 true scaffold1943: 384747-390018 Cicer arietinum
Ca_21937 0.5kb downstream 0.5kb downstream 500 false scaffold1943: 384747-385246 Cicer arietinum
Ca_21937 1.0kb upstream 1.0kb upstream 5772 true scaffold1943: 385247-391018 Cicer arietinum
Ca_21937 1.0kb upstream 1.0kb upstream 1000 false scaffold1943: 390019-391018 Cicer arietinum
Ca_21937 1.0kb downstream 1.0kb downstream 5772 true scaffold1943: 384247-390018 Cicer arietinum
Ca_21937 1.0kb downstream 1.0kb downstream 1000 false scaffold1943: 384247-385246 Cicer arietinum
Ca_21937 2.0kb upstream 2.0kb upstream 6772 true scaffold1943: 385247-392018 Cicer arietinum
Ca_21937 2.0kb upstream 2.0kb upstream 2000 false scaffold1943: 390019-392018 Cicer arietinum
Ca_21937 2.0kb downstream 2.0kb downstream 6772 true scaffold1943: 383247-390018 Cicer arietinum
Ca_21937 2.0kb downstream 2.0kb downstream 2000 false scaffold1943: 383247-385246 Cicer arietinum
Ca_21937 5.0kb upstream 5.0kb upstream 9772 true scaffold1943: 385247-395018 Cicer arietinum
Ca_21937 5.0kb upstream 5.0kb upstream 5000 false scaffold1943: 390019-395018 Cicer arietinum
Ca_21937 5.0kb downstream 5.0kb downstream 9772 true scaffold1943: 380247-390018 Cicer arietinum
Ca_21937 5.0kb downstream 5.0kb downstream 5000 false scaffold1943: 380247-385246 Cicer arietinum
Ca_21937 10.0kb upstream 10.0kb upstream 10991 true scaffold1943: 385247-396237 Cicer arietinum
Ca_21937 10.0kb upstream 10.0kb upstream 6219 false scaffold1943: 390019-396237 Cicer arietinum
Ca_21937 10.0kb downstream 10.0kb downstream 14772 true scaffold1943: 375247-390018 Cicer arietinum
Ca_21937 10.0kb downstream 10.0kb downstream 10000 false scaffold1943: 375247-385246 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303338 5265 Fabidae View MSA
124064338 5270 Rosid View MSA
123744145 5271 Pentapetalae View MSA
122790435 5272 Eudicot View MSA
122044402 5273 Angiosperm View MSA
121345695 5274 Embryophyte View MSA
123427497 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain