Gene : Ca_28108 C. arietinum v1.0
Defline:  (1 of 2) K02703 - photosystem II P680 reaction center D1 protein (psbA) Genomic Order:  1
Name:  ? Ca_28108 Secondary Identifier:  ? PAC:40152283
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Carietinum PHOTOALL-PWY Cicer arietinum pathologic  
Carietinum PWY-101 Cicer arietinum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_28108 0.5kb upstream 0.5kb upstream 1562 true scaffold999: 78210-79771 Cicer arietinum
Ca_28108 0.5kb upstream 0.5kb upstream 500 false scaffold999: 79272-79771 Cicer arietinum
Ca_28108 0.5kb downstream 0.5kb downstream 1562 true scaffold999: 77710-79271 Cicer arietinum
Ca_28108 0.5kb downstream 0.5kb downstream 500 false scaffold999: 77710-78209 Cicer arietinum
Ca_28108 1.0kb upstream 1.0kb upstream 2062 true scaffold999: 78210-80271 Cicer arietinum
Ca_28108 1.0kb upstream 1.0kb upstream 1000 false scaffold999: 79272-80271 Cicer arietinum
Ca_28108 1.0kb downstream 1.0kb downstream 2062 true scaffold999: 77210-79271 Cicer arietinum
Ca_28108 1.0kb downstream 1.0kb downstream 1000 false scaffold999: 77210-78209 Cicer arietinum
Ca_28108 2.0kb upstream 2.0kb upstream 3062 true scaffold999: 78210-81271 Cicer arietinum
Ca_28108 2.0kb upstream 2.0kb upstream 2000 false scaffold999: 79272-81271 Cicer arietinum
Ca_28108 2.0kb downstream 2.0kb downstream 3062 true scaffold999: 76210-79271 Cicer arietinum
Ca_28108 2.0kb downstream 2.0kb downstream 2000 false scaffold999: 76210-78209 Cicer arietinum
Ca_28108 5.0kb upstream 5.0kb upstream 6062 true scaffold999: 78210-84271 Cicer arietinum
Ca_28108 5.0kb upstream 5.0kb upstream 5000 false scaffold999: 79272-84271 Cicer arietinum
Ca_28108 5.0kb downstream 5.0kb downstream 6062 true scaffold999: 73210-79271 Cicer arietinum
Ca_28108 5.0kb downstream 5.0kb downstream 5000 false scaffold999: 73210-78209 Cicer arietinum
Ca_28108 10.0kb upstream 10.0kb upstream 11062 true scaffold999: 78210-89271 Cicer arietinum
Ca_28108 10.0kb upstream 10.0kb upstream 10000 false scaffold999: 79272-89271 Cicer arietinum
Ca_28108 10.0kb downstream 10.0kb downstream 11062 true scaffold999: 68210-79271 Cicer arietinum
Ca_28108 10.0kb downstream 10.0kb downstream 10000 false scaffold999: 68210-78209 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298238 5265 Fabidae View MSA
124074858 5270 Rosid View MSA
123753555 5271 Pentapetalae View MSA
122797414 5272 Eudicot View MSA
122047558 5273 Angiosperm View MSA
121350331 5274 Embryophyte View MSA
123381681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain