Gene : Ca_11421 C. arietinum v1.0
Defline:  (1 of 4) 2.5.1.32 - 15-cis-phytoene synthase / PSase Genomic Order:  2523
Name:  ? Ca_11421 Secondary Identifier:  ? PAC:40161152
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Carietinum CAROTENOID-PWY Cicer arietinum pathologic  
Carietinum PWY-6475 Cicer arietinum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_11421 0.5kb upstream 0.5kb upstream 2465 true Ca5: 41927141-41929605 Cicer arietinum
Ca_11421 0.5kb upstream 0.5kb upstream 500 false Ca5: 41927141-41927640 Cicer arietinum
Ca_11421 0.5kb downstream 0.5kb downstream 2465 true Ca5: 41927641-41930105 Cicer arietinum
Ca_11421 0.5kb downstream 0.5kb downstream 500 false Ca5: 41929606-41930105 Cicer arietinum
Ca_11421 1.0kb upstream 1.0kb upstream 2965 true Ca5: 41926641-41929605 Cicer arietinum
Ca_11421 1.0kb upstream 1.0kb upstream 1000 false Ca5: 41926641-41927640 Cicer arietinum
Ca_11421 1.0kb downstream 1.0kb downstream 2965 true Ca5: 41927641-41930605 Cicer arietinum
Ca_11421 1.0kb downstream 1.0kb downstream 1000 false Ca5: 41929606-41930605 Cicer arietinum
Ca_11421 2.0kb upstream 2.0kb upstream 3965 true Ca5: 41925641-41929605 Cicer arietinum
Ca_11421 2.0kb upstream 2.0kb upstream 2000 false Ca5: 41925641-41927640 Cicer arietinum
Ca_11421 2.0kb downstream 2.0kb downstream 3965 true Ca5: 41927641-41931605 Cicer arietinum
Ca_11421 2.0kb downstream 2.0kb downstream 2000 false Ca5: 41929606-41931605 Cicer arietinum
Ca_11421 5.0kb upstream 5.0kb upstream 6965 true Ca5: 41922641-41929605 Cicer arietinum
Ca_11421 5.0kb upstream 5.0kb upstream 5000 false Ca5: 41922641-41927640 Cicer arietinum
Ca_11421 5.0kb downstream 5.0kb downstream 6965 true Ca5: 41927641-41934605 Cicer arietinum
Ca_11421 5.0kb downstream 5.0kb downstream 5000 false Ca5: 41929606-41934605 Cicer arietinum
Ca_11421 10.0kb upstream 10.0kb upstream 11965 true Ca5: 41917641-41929605 Cicer arietinum
Ca_11421 10.0kb upstream 10.0kb upstream 10000 false Ca5: 41917641-41927640 Cicer arietinum
Ca_11421 10.0kb downstream 10.0kb downstream 11965 true Ca5: 41927641-41939605 Cicer arietinum
Ca_11421 10.0kb downstream 10.0kb downstream 10000 false Ca5: 41929606-41939605 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791897 5273 Angiosperm View MSA
122301040 5265 Fabidae View MSA
124070779 5270 Rosid View MSA
123742301 5271 Pentapetalae View MSA
122795137 5272 Eudicot View MSA
121063168 5274 Embryophyte View MSA
123102943 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain