Protein Family : Squalene synthetase 123742301

Method ID:  5271 Method Name:  Pentapetalae
Sequence Alignment:  View MSA Member Count:  38

38 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29835.t000015 (1 of 3) K02291 - phytoene synthase (crtB) R. communis v0.1 2046   29835: 165737-167782
29835.t000016 (1 of 3) K02291 - phytoene synthase (crtB) R. communis v0.1 3081   29835: 168336-171416
Cucsa.153210 (1 of 3) 2.5.1.32 - 15-cis-phytoene synthase / PSase C. sativus v1.0 2286   scaffold01124: 412600-414885
orange1.1g036368m.g (1 of 4) 2.5.1.32 - 15-cis-phytoene synthase / PSase C. sinensis v1.1 1697   scaffold00043: 537648-539344
Ciclev10018150m.g (1 of 1) KOG1459 - Squalene synthetase C. clementina v1.0 1714   scaffold_2: 587065-588778
Lus10013753.g (1 of 7) 2.5.1.32 - 15-cis-phytoene synthase / PSase L. usitatissimum v1.0 2512   scaffold1168: 335239-337750
Lus10039186.g (1 of 7) 2.5.1.32 - 15-cis-phytoene synthase / PSase L. usitatissimum v1.0 2198   scaffold34: 2009013-2011210
Gorai.010G126900 (1 of 4) 2.5.1.32 - 15-cis-phytoene synthase / PSase G. raimondii v2.1 1774   Chr10: 26981829-26983602
Thecc1EG040196 (1 of 3) K02291 - phytoene synthase (crtB) T. cacao v1.1 2626   scaffold_9: 27850549-27853174
Migut.D02541 (1 of 3) 2.5.1.32 - 15-cis-phytoene synthase / PSase M. guttatus v2.0 1646   scaffold_4: 20917941-20919586
Migut.O00865 (1 of 3) 2.5.1.32 - 15-cis-phytoene synthase / PSase M. guttatus v2.0 1681   scaffold_2956: 1797-3477
Glyma.11G256400 (1 of 2) KOG4411 - Phytoene/squalene synthetase G. max Wm82.a2.v1 1923   Chr11: 34614957-34616879
Glyma.18G000600 (1 of 9) 2.5.1.32 - 15-cis-phytoene synthase / PSase G. max Wm82.a2.v1 2397   Chr18: 99110-101506
Medtr3g083630 (1 of 5) 2.5.1.32 - 15-cis-phytoene synthase / PSase M. truncatula Mt4.0v1 2628   chr3: 37749162-37751789
SapurV1A.0081s0270 (1 of 6) 2.5.1.32 - 15-cis-phytoene synthase / PSase S. purpurea v1.0 2694   chr03: 16337996-16340689
Eucgr.B03619 (1 of 5) 2.5.1.32 - 15-cis-phytoene synthase / PSase E. grandis v2.0 2095   Chr02: 55924946-55927040
Prupe.6G006800 (1 of 3) 2.5.1.32 - 15-cis-phytoene synthase / PSase P. persica v2.1 2172   Pp06: 572052-574223
Manes.03G084700 (1 of 3) 2.5.1.32 - 15-cis-phytoene synthase / PSase M. esculenta v6.1 2057   Chromosome03: 13755566-13757622
Kalax.1101s0008 (1 of 6) 2.5.1.32 - 15-cis-phytoene synthase / PSase K. laxiflora v1.1 1715   scaffold_1101: 71236-72950
Kalax.0026s0034 (1 of 6) 2.5.1.32 - 15-cis-phytoene synthase / PSase K. laxiflora v1.1 1575   scaffold_26: 332064-333638
Kaladp0037s0246 (1 of 3) K02291 - phytoene synthase (crtB) K. fedtschenkoi v1.1 1677   Scaffold_37: 1750094-1751770
Tp57577_TGAC_v2_gene19320 (1 of 3) K02291 - phytoene synthase (crtB) T. pratense v2 2470   Tp57577_TGAC_v2_scaf_333: 243896-246365
DCAR_024333 (1 of 3) K02291 - phytoene synthase (crtB) D. carota v2.0 1952   DCARv2_Chr7: 12326481-12328432
Solyc01g005940.2 (1 of 3) 2.5.1.32 - 15-cis-phytoene synthase / PSase S. lycopersicum ITAG2.4 3229   SL2.50ch01: 613955-617183
Phvul.001G268600 (1 of 4) 2.5.1.32 - 15-cis-phytoene synthase / PSase P. vulgaris v2.1 2071   Chr01: 51323835-51325905
Potri.001G007700 (1 of 5) K02291 - phytoene synthase (crtB) P. trichocarpa v3.1 2209   Chr01: 518243-520451
Potri.003G218000 (1 of 5) K02291 - phytoene synthase (crtB) P. trichocarpa v3.1 2763   Chr03: 21421484-21424246
Podel.03G237900 (1 of 12) 2.5.1.32 - 15-cis-phytoene synthase / PSase P. deltoides WV94 v2.1 1613   Chr03: 22459972-22461584
Podel.03G238200 (1 of 5) K02291 - phytoene synthase (crtB) P. deltoides WV94 v2.1 1936   Chr03: 22477513-22479448
Podel.01G008700 (1 of 5) K02291 - phytoene synthase (crtB) P. deltoides WV94 v2.1 2438   Chr01: 606655-609092

38 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29835.m000640 R. communis v0.1 123742301 Squalene synthetase 2 5271 Pentapetalae
29835.m000639 R. communis v0.1 123742301 Squalene synthetase 2 5271 Pentapetalae
orange1.1g036368m C. sinensis v1.1 123742301 Squalene synthetase 1 5271 Pentapetalae
Gorai.010G126900.1 G. raimondii v2.1 123742301 Squalene synthetase 1 5271 Pentapetalae
Migut.O00865.1.p M. guttatus v2.0 123742301 Squalene synthetase 2 5271 Pentapetalae
Kalax.0026s0034.1.p K. laxiflora v1.1 123742301 Squalene synthetase 2 5271 Pentapetalae
Kalax.1101s0008.1.p K. laxiflora v1.1 123742301 Squalene synthetase 2 5271 Pentapetalae
Kaladp0037s0246.1.p K. fedtschenkoi v1.1 123742301 Squalene synthetase 1 5271 Pentapetalae
Tp57577_TGAC_v2_mRNA19990 T. pratense v2 123742301 Squalene synthetase 1 5271 Pentapetalae
DCAR_024333 D. carota v2.0 123742301 Squalene synthetase 1 5271 Pentapetalae
Solyc01g005940.2.1 S. lycopersicum ITAG2.4 123742301 Squalene synthetase 1 5271 Pentapetalae
Phvul.001G268600.1.p P. vulgaris v2.1 123742301 Squalene synthetase 1 5271 Pentapetalae
Potri.003G218000.1.p P. trichocarpa v3.1 123742301 Squalene synthetase 2 5271 Pentapetalae
Podel.01G008700.1.p P. deltoides WV94 v2.1 123742301 Squalene synthetase 3 5271 Pentapetalae
Podel.03G238200.1.p P. deltoides WV94 v2.1 123742301 Squalene synthetase 3 5271 Pentapetalae
Ca_11421 C. arietinum v1.0 123742301 Squalene synthetase 1 5271 Pentapetalae
HanXRQChr02g0056821 H. annuus r1.2 123742301 Squalene synthetase 1 5271 Pentapetalae
gene24795-v1.0-hybrid.t1 F. vesca v2.0.a2 123742301 Squalene synthetase 1 5271 Pentapetalae
Cucsa.153210.1 C. sativus v1.0 123742301 Squalene synthetase 1 5271 Pentapetalae
Ciclev10018150m C. clementina v1.0 123742301 Squalene synthetase 1 5271 Pentapetalae
Lus10039186 L. usitatissimum v1.0 123742301 Squalene synthetase 2 5271 Pentapetalae
Lus10013753 L. usitatissimum v1.0 123742301 Squalene synthetase 2 5271 Pentapetalae
Thecc1EG040196t1 T. cacao v1.1 123742301 Squalene synthetase 1 5271 Pentapetalae
Migut.D02541.1.p M. guttatus v2.0 123742301 Squalene synthetase 2 5271 Pentapetalae
Glyma.18G000600.1.p G. max Wm82.a2.v1 123742301 Squalene synthetase 2 5271 Pentapetalae
Glyma.11G256400.1.p G. max Wm82.a2.v1 123742301 Squalene synthetase 2 5271 Pentapetalae
Medtr3g083630.1 M. truncatula Mt4.0v1 123742301 Squalene synthetase 1 5271 Pentapetalae
SapurV1A.0081s0270.1.p S. purpurea v1.0 123742301 Squalene synthetase 1 5271 Pentapetalae
Eucgr.B03619.1.p E. grandis v2.0 123742301 Squalene synthetase 1 5271 Pentapetalae
Prupe.6G006800.1.p P. persica v2.1 123742301 Squalene synthetase 1 5271 Pentapetalae