Gene : Cucsa.153210 C. sativus v1.0
Defline:  (1 of 3) 2.5.1.32 - 15-cis-phytoene synthase / PSase Genomic Order:  64
Name:  ? Cucsa.153210 Secondary Identifier:  ? PAC:16964659
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus CAROTENOID-PWY Cucumis sativus pathologic  
Csativus PWY-6475 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.153210 0.5kb upstream 0.5kb upstream 2786 true scaffold01124: 412100-414885 Cucumis sativus
Cucsa.153210 0.5kb upstream 0.5kb upstream 500 false scaffold01124: 412100-412599 Cucumis sativus
Cucsa.153210 0.5kb downstream 0.5kb downstream 2786 true scaffold01124: 412600-415385 Cucumis sativus
Cucsa.153210 0.5kb downstream 0.5kb downstream 500 false scaffold01124: 414886-415385 Cucumis sativus
Cucsa.153210 1.0kb upstream 1.0kb upstream 3286 true scaffold01124: 411600-414885 Cucumis sativus
Cucsa.153210 1.0kb upstream 1.0kb upstream 1000 false scaffold01124: 411600-412599 Cucumis sativus
Cucsa.153210 1.0kb downstream 1.0kb downstream 3286 true scaffold01124: 412600-415885 Cucumis sativus
Cucsa.153210 1.0kb downstream 1.0kb downstream 1000 false scaffold01124: 414886-415885 Cucumis sativus
Cucsa.153210 2.0kb upstream 2.0kb upstream 4286 true scaffold01124: 410600-414885 Cucumis sativus
Cucsa.153210 2.0kb upstream 2.0kb upstream 2000 false scaffold01124: 410600-412599 Cucumis sativus
Cucsa.153210 2.0kb downstream 2.0kb downstream 4286 true scaffold01124: 412600-416885 Cucumis sativus
Cucsa.153210 2.0kb downstream 2.0kb downstream 2000 false scaffold01124: 414886-416885 Cucumis sativus
Cucsa.153210 5.0kb upstream 5.0kb upstream 7286 true scaffold01124: 407600-414885 Cucumis sativus
Cucsa.153210 5.0kb upstream 5.0kb upstream 5000 false scaffold01124: 407600-412599 Cucumis sativus
Cucsa.153210 5.0kb downstream 5.0kb downstream 7286 true scaffold01124: 412600-419885 Cucumis sativus
Cucsa.153210 5.0kb downstream 5.0kb downstream 5000 false scaffold01124: 414886-419885 Cucumis sativus
Cucsa.153210 10.0kb upstream 10.0kb upstream 12286 true scaffold01124: 402600-414885 Cucumis sativus
Cucsa.153210 10.0kb upstream 10.0kb upstream 10000 false scaffold01124: 402600-412599 Cucumis sativus
Cucsa.153210 10.0kb downstream 10.0kb downstream 12286 true scaffold01124: 412600-424885 Cucumis sativus
Cucsa.153210 10.0kb downstream 10.0kb downstream 10000 false scaffold01124: 414886-424885 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791897 5273 Angiosperm View MSA
122301040 5265 Fabidae View MSA
124070779 5270 Rosid View MSA
123742301 5271 Pentapetalae View MSA
122795137 5272 Eudicot View MSA
121063168 5274 Embryophyte View MSA
123102943 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain