Gene : SapurV1A.0081s0270 S. purpurea v1.0
Defline:  (1 of 6) 2.5.1.32 - 15-cis-phytoene synthase / PSase Genomic Order:  1611
Name:  ? SapurV1A.0081s0270 Secondary Identifier:  ? PAC:31444535
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea CAROTENOID-PWY Salix purpurea pathologic  
Spurpurea PWY-6475 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0081s0270 0.5kb upstream 0.5kb upstream 3194 true chr03: 16337996-16341189 Salix purpurea
SapurV1A.0081s0270 0.5kb upstream 0.5kb upstream 500 false chr03: 16340690-16341189 Salix purpurea
SapurV1A.0081s0270 0.5kb downstream 0.5kb downstream 3194 true chr03: 16337496-16340689 Salix purpurea
SapurV1A.0081s0270 0.5kb downstream 0.5kb downstream 500 false chr03: 16337496-16337995 Salix purpurea
SapurV1A.0081s0270 1.0kb upstream 1.0kb upstream 3694 true chr03: 16337996-16341689 Salix purpurea
SapurV1A.0081s0270 1.0kb upstream 1.0kb upstream 1000 false chr03: 16340690-16341689 Salix purpurea
SapurV1A.0081s0270 1.0kb downstream 1.0kb downstream 3694 true chr03: 16336996-16340689 Salix purpurea
SapurV1A.0081s0270 1.0kb downstream 1.0kb downstream 1000 false chr03: 16336996-16337995 Salix purpurea
SapurV1A.0081s0270 2.0kb upstream 2.0kb upstream 4694 true chr03: 16337996-16342689 Salix purpurea
SapurV1A.0081s0270 2.0kb upstream 2.0kb upstream 2000 false chr03: 16340690-16342689 Salix purpurea
SapurV1A.0081s0270 2.0kb downstream 2.0kb downstream 4694 true chr03: 16335996-16340689 Salix purpurea
SapurV1A.0081s0270 2.0kb downstream 2.0kb downstream 2000 false chr03: 16335996-16337995 Salix purpurea
SapurV1A.0081s0270 5.0kb upstream 5.0kb upstream 7694 true chr03: 16337996-16345689 Salix purpurea
SapurV1A.0081s0270 5.0kb upstream 5.0kb upstream 5000 false chr03: 16340690-16345689 Salix purpurea
SapurV1A.0081s0270 5.0kb downstream 5.0kb downstream 7694 true chr03: 16332996-16340689 Salix purpurea
SapurV1A.0081s0270 5.0kb downstream 5.0kb downstream 5000 false chr03: 16332996-16337995 Salix purpurea
SapurV1A.0081s0270 10.0kb upstream 10.0kb upstream 12694 true chr03: 16337996-16350689 Salix purpurea
SapurV1A.0081s0270 10.0kb upstream 10.0kb upstream 10000 false chr03: 16340690-16350689 Salix purpurea
SapurV1A.0081s0270 10.0kb downstream 10.0kb downstream 12694 true chr03: 16327996-16340689 Salix purpurea
SapurV1A.0081s0270 10.0kb downstream 10.0kb downstream 10000 false chr03: 16327996-16337995 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791897 5273 Angiosperm View MSA
122454227 5262 Malpighiales View MSA
124245984 5268 Malvidae View MSA
124070779 5270 Rosid View MSA
123742301 5271 Pentapetalae View MSA
122795137 5272 Eudicot View MSA
121063168 5274 Embryophyte View MSA
123102943 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain