Gene : Ciclev10018150m.g C. clementina v1.0
Defline:  (1 of 1) KOG1459 - Squalene synthetase Genomic Order:  75
Name:  ? Ciclev10018150m.g Secondary Identifier:  ? PAC:20816332
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina CAROTENOID-PWY Citrus clementina pathologic  
Cclementina PWY-6475 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10018150m.g 0.5kb upstream 0.5kb upstream 2214 true scaffold_2: 586565-588778 Citrus clementina
Ciclev10018150m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 586565-587064 Citrus clementina
Ciclev10018150m.g 0.5kb downstream 0.5kb downstream 2214 true scaffold_2: 587065-589278 Citrus clementina
Ciclev10018150m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 588779-589278 Citrus clementina
Ciclev10018150m.g 1.0kb upstream 1.0kb upstream 2714 true scaffold_2: 586065-588778 Citrus clementina
Ciclev10018150m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 586065-587064 Citrus clementina
Ciclev10018150m.g 1.0kb downstream 1.0kb downstream 2714 true scaffold_2: 587065-589778 Citrus clementina
Ciclev10018150m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 588779-589778 Citrus clementina
Ciclev10018150m.g 2.0kb upstream 2.0kb upstream 3714 true scaffold_2: 585065-588778 Citrus clementina
Ciclev10018150m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 585065-587064 Citrus clementina
Ciclev10018150m.g 2.0kb downstream 2.0kb downstream 3714 true scaffold_2: 587065-590778 Citrus clementina
Ciclev10018150m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 588779-590778 Citrus clementina
Ciclev10018150m.g 5.0kb upstream 5.0kb upstream 6714 true scaffold_2: 582065-588778 Citrus clementina
Ciclev10018150m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 582065-587064 Citrus clementina
Ciclev10018150m.g 5.0kb downstream 5.0kb downstream 6714 true scaffold_2: 587065-593778 Citrus clementina
Ciclev10018150m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 588779-593778 Citrus clementina
Ciclev10018150m.g 10.0kb upstream 10.0kb upstream 11714 true scaffold_2: 577065-588778 Citrus clementina
Ciclev10018150m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 577065-587064 Citrus clementina
Ciclev10018150m.g 10.0kb downstream 10.0kb downstream 11714 true scaffold_2: 587065-598778 Citrus clementina
Ciclev10018150m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 588779-598778 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791897 5273 Angiosperm View MSA
124347369 5266 SBM View MSA
124245984 5268 Malvidae View MSA
124070779 5270 Rosid View MSA
123742301 5271 Pentapetalae View MSA
122795137 5272 Eudicot View MSA
121063168 5274 Embryophyte View MSA
123102943 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain