PhytoMine: Gene Ca_23825 C. arietinum v1.0

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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier	Organism Name	Analysis Method	Analysis Status
Carietinum PWY-6351	Cicer arietinum	pathologic
Carietinum PWY-6352	Cicer arietinum	pathologic

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

Other

0 Synonyms

20 Flanking Regions

Region Name	Flank Size	Direction	Length	Gene Included?	Chromosome Location	Organism Name
Ca_23825 0.5kb upstream	0.5kb	upstream	4004	true	Ca5: 29134721-29138724	Cicer arietinum
Ca_23825 0.5kb upstream	0.5kb	upstream	500	false	Ca5: 29134721-29135220	Cicer arietinum
Ca_23825 0.5kb downstream	0.5kb	downstream	4004	true	Ca5: 29135221-29139224	Cicer arietinum
Ca_23825 0.5kb downstream	0.5kb	downstream	500	false	Ca5: 29138725-29139224	Cicer arietinum
Ca_23825 1.0kb upstream	1.0kb	upstream	4504	true	Ca5: 29134221-29138724	Cicer arietinum
Ca_23825 1.0kb upstream	1.0kb	upstream	1000	false	Ca5: 29134221-29135220	Cicer arietinum
Ca_23825 1.0kb downstream	1.0kb	downstream	4504	true	Ca5: 29135221-29139724	Cicer arietinum
Ca_23825 1.0kb downstream	1.0kb	downstream	1000	false	Ca5: 29138725-29139724	Cicer arietinum
Ca_23825 2.0kb upstream	2.0kb	upstream	5504	true	Ca5: 29133221-29138724	Cicer arietinum
Ca_23825 2.0kb upstream	2.0kb	upstream	2000	false	Ca5: 29133221-29135220	Cicer arietinum
Ca_23825 2.0kb downstream	2.0kb	downstream	5504	true	Ca5: 29135221-29140724	Cicer arietinum
Ca_23825 2.0kb downstream	2.0kb	downstream	2000	false	Ca5: 29138725-29140724	Cicer arietinum
Ca_23825 5.0kb upstream	5.0kb	upstream	8504	true	Ca5: 29130221-29138724	Cicer arietinum
Ca_23825 5.0kb upstream	5.0kb	upstream	5000	false	Ca5: 29130221-29135220	Cicer arietinum
Ca_23825 5.0kb downstream	5.0kb	downstream	8504	true	Ca5: 29135221-29143724	Cicer arietinum
Ca_23825 5.0kb downstream	5.0kb	downstream	5000	false	Ca5: 29138725-29143724	Cicer arietinum
Ca_23825 10.0kb upstream	10.0kb	upstream	13504	true	Ca5: 29125221-29138724	Cicer arietinum
Ca_23825 10.0kb upstream	10.0kb	upstream	10000	false	Ca5: 29125221-29135220	Cicer arietinum
Ca_23825 10.0kb downstream	10.0kb	downstream	13504	true	Ca5: 29135221-29148724	Cicer arietinum
Ca_23825 10.0kb downstream	10.0kb	downstream	10000	false	Ca5: 29138725-29148724	Cicer arietinum

7 Protein Familys

Cluster ID	Method ID	Method Name	Sequence Alignment
122311925	5265	Fabidae	View MSA
124061441	5270	Rosid	View MSA
123746948	5271	Pentapetalae	View MSA
122794503	5272	Eudicot	View MSA
122045455	5273	Angiosperm	View MSA
121310450	5274	Embryophyte	View MSA
123428791	5275	Viridiplantae	View MSA

Defline:	(1 of 3) PTHR23086:SF33 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 1-RELATED	Genomic Order:	1279
Name:	Ca_23825	Secondary Identifier:	PAC:40161542

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Message:	---- Current page: ---- /phytomine/report.do?id=1111002257 ---- Current query: ---- <query name="" model="genomic" view="Strain.features.primaryIdentifier Strain.features.length Strain.features.chromosome.primaryIdentifier Strain.features.chromosomeLocation.start Strain.features.chromosomeLocation.end Strain.features.organism.name" longDescription=""><join path="Strain.features.chromosome" style="OUTER"/><join path="Strain.features.chromosomeLocation" style="OUTER"/><join path="Strain.features.organism" style="OUTER"/><constraint path="Strain.id" op="=" value="704000002"/></query>

Gene : Ca_23825 C. arietinum v1.0

Phytozome Links

Links to other Mines

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

Other

0 Synonyms

20 Flanking Regions

7 Protein Familys

0 Rna Seq Expressions

0 Strain