Gene : Ca_25800 C. arietinum v1.0
Defline:  (1 of 3) K09840 - 9-cis-epoxycarotenoid dioxygenase (NCED) Genomic Order:  2734
Name:  ? Ca_25800 Secondary Identifier:  ? PAC:40149576
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Carietinum PWY-695 Cicer arietinum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_25800 0.5kb upstream 0.5kb upstream 2363 true Ca1: 41664707-41667069 Cicer arietinum
Ca_25800 0.5kb upstream 0.5kb upstream 500 false Ca1: 41664707-41665206 Cicer arietinum
Ca_25800 0.5kb downstream 0.5kb downstream 2363 true Ca1: 41665207-41667569 Cicer arietinum
Ca_25800 0.5kb downstream 0.5kb downstream 500 false Ca1: 41667070-41667569 Cicer arietinum
Ca_25800 1.0kb upstream 1.0kb upstream 2863 true Ca1: 41664207-41667069 Cicer arietinum
Ca_25800 1.0kb upstream 1.0kb upstream 1000 false Ca1: 41664207-41665206 Cicer arietinum
Ca_25800 1.0kb downstream 1.0kb downstream 2863 true Ca1: 41665207-41668069 Cicer arietinum
Ca_25800 1.0kb downstream 1.0kb downstream 1000 false Ca1: 41667070-41668069 Cicer arietinum
Ca_25800 2.0kb upstream 2.0kb upstream 3863 true Ca1: 41663207-41667069 Cicer arietinum
Ca_25800 2.0kb upstream 2.0kb upstream 2000 false Ca1: 41663207-41665206 Cicer arietinum
Ca_25800 2.0kb downstream 2.0kb downstream 3863 true Ca1: 41665207-41669069 Cicer arietinum
Ca_25800 2.0kb downstream 2.0kb downstream 2000 false Ca1: 41667070-41669069 Cicer arietinum
Ca_25800 5.0kb upstream 5.0kb upstream 6863 true Ca1: 41660207-41667069 Cicer arietinum
Ca_25800 5.0kb upstream 5.0kb upstream 5000 false Ca1: 41660207-41665206 Cicer arietinum
Ca_25800 5.0kb downstream 5.0kb downstream 6863 true Ca1: 41665207-41672069 Cicer arietinum
Ca_25800 5.0kb downstream 5.0kb downstream 5000 false Ca1: 41667070-41672069 Cicer arietinum
Ca_25800 10.0kb upstream 10.0kb upstream 11863 true Ca1: 41655207-41667069 Cicer arietinum
Ca_25800 10.0kb upstream 10.0kb upstream 10000 false Ca1: 41655207-41665206 Cicer arietinum
Ca_25800 10.0kb downstream 10.0kb downstream 11863 true Ca1: 41665207-41677069 Cicer arietinum
Ca_25800 10.0kb downstream 10.0kb downstream 10000 false Ca1: 41667070-41677069 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310479 5265 Fabidae View MSA
124068526 5270 Rosid View MSA
123741505 5271 Pentapetalae View MSA
122796781 5272 Eudicot View MSA
122050852 5273 Angiosperm View MSA
121350265 5274 Embryophyte View MSA
123428777 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain