Gene : Ca_00149 C. arietinum v1.0

Defline:  (1 of 2) PTHR32370:SF6 - ROOT PHOTOTROPISM PROTEIN 3 Genomic Order:  149
Name:  ? Ca_00149 Secondary Identifier:  ? PAC:40149664

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_00149 0.5kb upstream 0.5kb upstream 3289 true Ca1: 1213219-1216507 Cicer arietinum
Ca_00149 0.5kb upstream 0.5kb upstream 500 false Ca1: 1213219-1213718 Cicer arietinum
Ca_00149 0.5kb downstream 0.5kb downstream 3289 true Ca1: 1213719-1217007 Cicer arietinum
Ca_00149 0.5kb downstream 0.5kb downstream 500 false Ca1: 1216508-1217007 Cicer arietinum
Ca_00149 1.0kb upstream 1.0kb upstream 3789 true Ca1: 1212719-1216507 Cicer arietinum
Ca_00149 1.0kb upstream 1.0kb upstream 1000 false Ca1: 1212719-1213718 Cicer arietinum
Ca_00149 1.0kb downstream 1.0kb downstream 3789 true Ca1: 1213719-1217507 Cicer arietinum
Ca_00149 1.0kb downstream 1.0kb downstream 1000 false Ca1: 1216508-1217507 Cicer arietinum
Ca_00149 2.0kb upstream 2.0kb upstream 4789 true Ca1: 1211719-1216507 Cicer arietinum
Ca_00149 2.0kb upstream 2.0kb upstream 2000 false Ca1: 1211719-1213718 Cicer arietinum
Ca_00149 2.0kb downstream 2.0kb downstream 4789 true Ca1: 1213719-1218507 Cicer arietinum
Ca_00149 2.0kb downstream 2.0kb downstream 2000 false Ca1: 1216508-1218507 Cicer arietinum
Ca_00149 5.0kb upstream 5.0kb upstream 7789 true Ca1: 1208719-1216507 Cicer arietinum
Ca_00149 5.0kb upstream 5.0kb upstream 5000 false Ca1: 1208719-1213718 Cicer arietinum
Ca_00149 5.0kb downstream 5.0kb downstream 7789 true Ca1: 1213719-1221507 Cicer arietinum
Ca_00149 5.0kb downstream 5.0kb downstream 5000 false Ca1: 1216508-1221507 Cicer arietinum
Ca_00149 10.0kb upstream 10.0kb upstream 12789 true Ca1: 1203719-1216507 Cicer arietinum
Ca_00149 10.0kb upstream 10.0kb upstream 10000 false Ca1: 1203719-1213718 Cicer arietinum
Ca_00149 10.0kb downstream 10.0kb downstream 12789 true Ca1: 1213719-1226507 Cicer arietinum
Ca_00149 10.0kb downstream 10.0kb downstream 10000 false Ca1: 1216508-1226507 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296483 5265 Fabidae View MSA
124063481 5270 Rosid View MSA
123746549 5271 Pentapetalae View MSA
122794613 5272 Eudicot View MSA
122049761 5273 Angiosperm View MSA
121347435 5274 Embryophyte View MSA
123380549 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain